RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 FAM167BQ9BTA0 163 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 PRDM9Q9NQV7 894 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 RNF6Q9Y252 685 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 PHF3Q92576 2039 aaKnown RBP14.83□□□□□ -0.03
RAB40C-202ENST00000509637 ZFHX3Q15911 3703 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 TRBV11-1A0A0K0K1C0 115 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 CDC7O00311 574 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 PGAM1P18669 254 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 CCND1P24385 295 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 PTGS2P35354 604 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 GRK3P35626 688 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 RGS4P49798 205 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 NXPE4Q6UWF7 544 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 VN1R5Q7Z5H4 357 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 SCUBE1Q8IWY4 988 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 ZNF321PQ8N8H1 164 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 ZFP62Q8NB50 900 aaPredicted RBP14.83□□□□□ -0.04
RAB40C-202ENST00000509637 TRIM58Q8NG06 486 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 PDLIM2Q96JY6 352 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 QRFPRQ96P65 431 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 FAM129AQ9BZQ8 928 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 DEFB127Q9H1M4 99 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 PPIEQ9UNP9 301 aaKnown RBP14.83□□□□□ -0.04
RAB40C-202ENST00000509637 SLC22A14Q9Y267 594 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 PSAT1Q9Y617 370 aa14.83□□□□□ -0.04
RAB40C-202ENST00000509637 PRRG2O14669 202 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 ITGA10O75578 1167 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 MYO1DO94832 1006 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 TPOP07202 933 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 RNH1P13489 461 aaKnown RBP14.82□□□□□ -0.04
RAB40C-202ENST00000509637 HNRNPH1P31943 449 aaKnown RBP14.82□□□□□ -0.04
RAB40C-202ENST00000509637 AHRP35869 848 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 GDF5P43026 501 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 CSHL1Q14406 222 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 ZNF460Q14592 562 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 TOR1AIP1Q5JTV8 583 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 KIAA0408Q6ZU52 694 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 THOC6Q86W42 341 aaKnown RBP14.82□□□□□ -0.04
RAB40C-202ENST00000509637 PPIL6Q8IXY8 311 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 HORMAD2Q8N7B1 307 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 FAM98AQ8NCA5 519 aaKnown RBP14.82□□□□□ -0.04
RAB40C-202ENST00000509637 B3GNT7Q8NFL0 401 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 LILRB4Q8NHJ6 448 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 DEFB126Q9BYW3 111 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 KCMF1Q9P0J7 381 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 TNFRSF10DQ9UBN6 386 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 VWA7Q9Y334 891 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 LIPGQ9Y5X9 500 aa14.82□□□□□ -0.04
RAB40C-202ENST00000509637 CDC40O60508 579 aaKnown RBP eCLIP14.81□□□□□ -0.04
RAB40C-202ENST00000509637 JAK1P23458 1154 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 NUP107P57740 925 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 IL2P60568 153 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 BTN3A2P78410 334 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 RGS1Q08116 209 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 LRRC8EQ6NSJ5 796 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 TMPRSS11BQ86T26 416 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 LRRC8AQ8IWT6 810 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.81□□□□□ -0.04
RAB40C-202ENST00000509637 GPATCH11Q8N954 259 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 CA5BP1Q8WTZ4 195 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 ANKRD49Q8WVL7 239 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 NCLNQ969V3 563 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 CERS2Q96G23 380 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 PDLIM5Q96HC4 596 aaKnown RBP14.81□□□□□ -0.04
RAB40C-202ENST00000509637 PELI2Q9HAT8 420 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 PNO1Q9NRX1 252 aaKnown RBP14.81□□□□□ -0.04
RAB40C-202ENST00000509637 PPP2R2CQ9Y2T4 447 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 AKAP6Q13023 2319 aa14.81□□□□□ -0.04
RAB40C-202ENST00000509637 NPEPPSL1A6NEC2 478 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 FAM90A27PA6NNH2 459 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 G3V3Y1 287 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 DNALI1O14645 258 aaPredicted RBP14.8□□□□□ -0.04
RAB40C-202ENST00000509637 TFECO14948 347 aaPredicted RBP14.8□□□□□ -0.04
RAB40C-202ENST00000509637 TP73O15350 636 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 OR6B1O95007 311 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 MLYCDO95822 493 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 SERPINA6P08185 405 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 HIST1H2AGP0C0S8 130 aaPredicted RBP14.8□□□□□ -0.04
RAB40C-202ENST00000509637 HIST1H2ADP20671 130 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 CAPN3P20807 821 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 DLX5P56178 289 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 AP1S2P56377 157 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 RBBP5Q15291 538 aaKnown RBP14.8□□□□□ -0.04
RAB40C-202ENST00000509637 SPANXN3Q5MJ09 141 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 RTL6Q6ICC9 239 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 SLCO4C1Q6ZQN7 724 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 ABHD13Q7L211 337 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 GALNT7Q86SF2 657 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 LIX1LQ8IVB5 337 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 PALM2Q8IXS6 379 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 CYP4Z2PQ8N1L4 340 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 MS4A6EQ96DS6 147 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 HIST1H2AHQ96KK5 128 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 CSF3RQ99062 836 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 HIST1H2AJQ99878 128 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 H2AFJQ9BTM1 129 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 FBXW2Q9UKT8 454 aa14.8□□□□□ -0.04
RAB40C-202ENST00000509637 KLF13Q9Y2Y9 288 aaPredicted RBP14.8□□□□□ -0.04
RAB40C-202ENST00000509637 CYR61O00622 381 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 NCKAP5O14513 1909 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms