RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 RUNX2Q13950 521 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 USP10Q14694 798 aaKnown RBP10.23□□□□□ -0.77
RNF4-212ENST00000509258 TGFBIQ15582 683 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 ZNF766Q5HY98 468 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 TOR1AIP1Q5JTV8 583 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 XKRXQ6PP77 449 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 CMC1Q7Z7K0 106 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 ZNF227Q86WZ6 799 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 NKAPQ8N5F7 415 aaKnown RBP10.23□□□□□ -0.77
RNF4-212ENST00000509258 SLC5A8Q8N695 610 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 TMEM178AQ8NBL3 297 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 FBXO25Q8TCJ0 367 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 PYROXD1Q8WU10 500 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 MAGED4Q96JG8 741 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 GPR22Q99680 433 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 UTP23Q9BRU9 249 aaKnown RBP10.23□□□□□ -0.77
RNF4-212ENST00000509258 TRIM54Q9BYV2 358 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 DERL2Q9GZP9 239 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 GPAMQ9HCL2 828 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 NECTIN3Q9NQS3 549 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 ANKRD10Q9NXR5 420 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 CTNNAL1Q9UBT7 734 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 ADGRG4Q8IZF6 3080 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 IGKV3D-11A0A0A0MRZ8 115 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 ESYT3A0FGR9 886 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 URADA6NGE7 173 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 CCDC166P0CW27 439 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 AGAP20933 346 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 JAK1P23458 1154 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 EEF1DP29692 281 aaKnown RBP10.22□□□□□ -0.77
RNF4-212ENST00000509258 PPP2R1BP30154 601 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 HSPA7P48741 367 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 PLTPP55058 493 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 SLC26A5P58743 744 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 SLC7A5Q01650 507 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 SLBPQ14493 270 aaKnown RBP eCLIP10.22□□□□□ -0.77
RNF4-212ENST00000509258 HERC3Q15034 1050 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 RBBP5Q15291 538 aaKnown RBP10.22□□□□□ -0.77
RNF4-212ENST00000509258 NSDHLQ15738 373 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 ZKSCAN8Q15776 578 aaPredicted RBP10.22□□□□□ -0.77
RNF4-212ENST00000509258 KBTBD12Q3ZCT8 623 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 KRTCAP3Q53RY4 240 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 CA13Q8N1Q1 262 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 MDS2Q8NDY4 140 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 NFAM1Q8NET5 270 aaPredicted RBP10.22□□□□□ -0.77
RNF4-212ENST00000509258 M1APQ8TC57 530 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 THAP3Q8WTV1 239 aaPredicted RBP10.22□□□□□ -0.77
RNF4-212ENST00000509258 ATL1Q8WXF7 558 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 ANKRD7Q92527 254 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 TBC1D20Q96BZ9 403 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 LURAP1Q96LR2 239 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 QRFPRQ96P65 431 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 OR1F2PQ96R84 312 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 EGFL8Q99944 293 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 RHBGQ9H310 441 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 POPDC3Q9HBV1 291 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 RNF14Q9UBS8 474 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 ZNF490Q9ULM2 529 aaPredicted RBP10.22□□□□□ -0.77
RNF4-212ENST00000509258 DYRK1BQ9Y463 629 aa10.22□□□□□ -0.77
RNF4-212ENST00000509258 PDZD2O15018 2839 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 NINQ8N4C6 2090 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 MYOCOSA0A1B0GUC4 107 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 HMX2A2RU54 273 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 A8MUA0 341 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 SNRPB2P08579 225 aaKnown RBP10.21□□□□□ -0.77
RNF4-212ENST00000509258 SLC35E2BP0CK96 405 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 C1GALT1C1LP0DN25 315 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 CD96P40200 585 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 OR4D2P58180 307 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 ETF1P62495 437 aaKnown RBP10.21□□□□□ -0.77
RNF4-212ENST00000509258 POU4F1Q01851 419 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 ALDH6A1Q02252 535 aaKnown RBP10.21□□□□□ -0.77
RNF4-212ENST00000509258 OC90Q02509 493 aaPredicted RBP10.21□□□□□ -0.77
RNF4-212ENST00000509258 GUCY2DQ02846 1103 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 RGS1Q08116 209 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 TUBA3CQ13748 450 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 ACER2Q5QJU3 275 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 FAM219BQ5XKK7 198 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 TUBA3EQ6PEY2 450 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 C3orf62Q6ZUJ4 267 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 ZNF572Q7Z3I7 529 aaPredicted RBP10.21□□□□□ -0.77
RNF4-212ENST00000509258 ADAMTSL2Q86TH1 951 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 CCDC25Q86WR0 208 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 LGI4Q8N135 537 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 RNF175Q8N4F7 328 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 ELP5Q8TE02 316 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 FBF1Q8TES7 1133 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 EXT2Q93063 718 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 MS4A6EQ96DS6 147 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 UBXN10Q96LJ8 280 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 CSF3RQ99062 836 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 CPNE1Q99829 537 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 AIF1LQ9BQI0 150 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 TRIM8Q9BZR9 551 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 MMP25Q9NPA2 562 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 ZDHHC18Q9NUE0 388 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 TINAGQ9UJW2 476 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 ZNF223Q9UK11 482 aaPredicted RBP10.21□□□□□ -0.77
RNF4-212ENST00000509258 KCNE2Q9Y6J6 123 aa10.21□□□□□ -0.77
RNF4-212ENST00000509258 EXPH5Q8NEV8 1989 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms