RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ERRFI1Q9UJM3 462 aaPredicted RBP13.91□□□□□ -0.18
UBE2D3-228ENST00000508974 PTBP2Q9UKA9 531 aaKnown RBP13.91□□□□□ -0.18
UBE2D3-228ENST00000508974 SVILO95425 2214 aa13.91□□□□□ -0.18
UBE2D3-228ENST00000508974 LRIT2A6NDA9 550 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 OR5H15A6NDH6 313 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 E2F3O00716 465 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 SH3BGRLO75368 114 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 CD22P20273 847 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 CRABP2P29373 138 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 SLC26A5P58743 744 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 PMP22Q01453 160 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 CHIT1Q13231 466 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 RUNX2Q13950 521 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 EXT1Q16394 746 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 ACER2Q5QJU3 275 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 VN1R5Q7Z5H4 357 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 ISCA2Q86U28 154 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 FAM47BQ8NA70 645 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 ST6GALNAC3Q8NDV1 305 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 TTLQ8NG68 377 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 SUN3Q8TAQ9 357 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 STAG3L4Q8TBR4 150 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 M1APQ8TC57 530 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 MS4A6EQ96DS6 147 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 PTCD3Q96EY7 689 aaKnown RBP13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 TAAR6Q96RI8 345 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 NPAS2Q99743 824 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 CD244Q9BZW8 370 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 NMRAL1Q9HBL8 299 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 NUDT4Q9NZJ9 180 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 DMGDHQ9UI17 866 aaKnown RBP13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 ZNF490Q9ULM2 529 aaPredicted RBP13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 ACOT9Q9Y305 439 aa13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 SPTAN1Q13813 2472 aaKnown RBP13.9□□□□□ -0.18
UBE2D3-228ENST00000508974 KERAO60938 352 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 ACSL3O95573 720 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 PCNAP12004 261 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 GP1BBP13224 206 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 EPORP19235 508 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 CERS1P27544 350 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 PHBP35232 272 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 IRF8Q02556 426 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 CDKL4Q5MAI5 379 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 TRIM40Q6P9F5 258 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 QSOX2Q6ZRP7 698 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 ZGRF1Q86YA3 2104 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 CENPLQ8N0S6 344 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 BCORP1Q8N888 145 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 UHMK1Q8TAS1 419 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 ZNF354BQ96LW1 612 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 SIGLEC12Q96PQ1 595 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 F2RL3Q96RI0 385 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 ATOH8Q96SQ7 321 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 HES7Q9BYE0 225 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 REXO4Q9GZR2 422 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 COPS7BQ9H9Q2 264 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 MMP25Q9NPA2 562 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 PRDM9Q9NQV7 894 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 KLHL1Q9NR64 748 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 SNX15Q9NRS6 342 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 OPTCQ9UBM4 332 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 MTRF1LQ9UGC7 380 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 OSGIN2Q9Y236 505 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 ICE1Q9Y2F5 2266 aa13.89□□□□□ -0.19
UBE2D3-228ENST00000508974 MYOCOSA0A1B0GUC4 107 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 HMX2A2RU54 273 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 LRRC14BA6NHZ5 514 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 B3GALT2O43825 422 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 PRAMEF2O60811 474 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 CLEC3AO75596 197 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 RASAL1O95294 804 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 TBX6O95947 436 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 C2P06681 752 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 EDN3P14138 238 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 PPP2R1BP30154 601 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 MSH2P43246 934 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 HNRNPFP52597 415 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 TAS2R50P59544 299 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 OC90Q02509 493 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 TUBA3CQ13748 450 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 HIST2H2ACQ16777 129 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 MEP1AQ16819 746 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 HIST2H2AA3Q6FI13 130 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 H3F3CQ6NXT2 135 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 RPUSD3Q6P087 351 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 TUBA3EQ6PEY2 450 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 LRRC70Q7Z2Q7 622 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 CLNKQ7Z7G1 428 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 MYLK4Q86YV6 388 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 RNF175Q8N4F7 328 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 MMGT1Q8N4V1 131 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 SLC5A8Q8N695 610 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 TMEM52Q8NDY8 209 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 OR2L5Q8NG80 312 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 SREK1Q8WXA9 508 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 EFCAB11Q9BUY7 163 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 RNF32Q9H0A6 362 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 VPS11Q9H270 941 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 CDC42EP4Q9H3Q1 356 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 EHD1Q9H4M9 534 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms