RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 FOXO6A8MYZ6 492 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 SGK494L7N484 410 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 CLDN4O14493 209 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 BIRC5O15392 142 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 NPHS1O60500 1241 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 PRAMEF4O60810 478 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 ULK1O75385 1050 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 SPAG7O75391 227 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 RDH16O75452 317 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 MED26O95402 600 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 STATHP02808 62 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 HEXBP07686 556 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 FHP07954 510 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 SMIM10L1P0DMW3 83 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 NEFHP12036 1026 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 H2AFXP16104 143 aaPredicted RBP8.65□□□□□ -1.02
NUP54-207ENST00000508583 OTX2P32243 289 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 SSR2P43308 183 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 CCR10P46092 362 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 XCR1P46094 333 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 PLA2G16P53816 162 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 SLC18A1P54219 525 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 CDH13P55290 713 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 BTN3A2P78410 334 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 GALNT1Q10472 559 aaPredicted RBP8.65□□□□□ -1.02
NUP54-207ENST00000508583 HYAL2Q12891 473 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 PCLAFQ15004 111 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 UNC50Q53HI1 259 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 TNFAIP8L3Q5GJ75 292 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 DEPDC1Q5TB30 811 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 MFSD4BQ5TF39 518 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 PRAMEF9Q5VWM5 478 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 LCN10Q6JVE6 187 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 MED25Q71SY5 747 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 EXOC3L1Q86VI1 746 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 C10orf107Q8IVU9 208 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 GBP7Q8N8V2 638 aaPredicted RBP8.65□□□□□ -1.02
NUP54-207ENST00000508583 TMEM102Q8N9M5 508 aaPredicted RBP8.65□□□□□ -1.02
NUP54-207ENST00000508583 CLEC1AQ8NC01 280 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 METTL6Q8TCB7 284 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.65□□□□□ -1.02
NUP54-207ENST00000508583 SELENOMQ8WWX9 145 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 TBC1D20Q96BZ9 403 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 MOCOSQ96EN8 888 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 SMIM10Q96HG1 83 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 QRFPRQ96P65 431 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 CDK15Q96Q40 435 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 MTERF1Q99551 399 aaKnown RBP8.65□□□□□ -1.02
NUP54-207ENST00000508583 SPSB2Q99619 263 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 MACROD1Q9BQ69 325 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 ARHGAP9Q9BRR9 750 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 SYNPO2LQ9H987 977 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 TMBIM4Q9HC24 238 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 LYRM4Q9HD34 91 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 MID1IP1Q9NPA3 183 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 KCNK9Q9NPC2 374 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 PFDN4Q9NQP4 134 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 SLC22A11Q9NSA0 550 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 NKIRAS1Q9NYS0 192 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 C3orf18Q9UK00 162 aa8.65□□□□□ -1.02
NUP54-207ENST00000508583 MRPS18BQ9Y676 258 aaKnown RBP8.65□□□□□ -1.02
NUP54-207ENST00000508583 ARHGAP10A1A4S6 786 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 MAGEB17A8MXT2 336 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 IDSB3KWA1 339 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 AGPSO00116 658 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 FFAR3O14843 346 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 NKX2-8O15522 239 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 GPR42O15529 346 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 GUCY1B2O75343 617 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 SCELO95171 688 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 BMP10O95393 424 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 TGFB1P01137 390 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 ACPPP15309 386 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 HIST1H1TP22492 207 aaPredicted RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 GRK2P25098 689 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 PPP2R1BP30154 601 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 ALDH3A1P30838 453 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 TLX1P31314 330 aaPredicted RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 HNRNPH1P31943 449 aaKnown RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 SERPINB4P48594 390 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 EMP2P54851 167 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 RAB8AP61006 207 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 RPS18P62269 152 aaKnown RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 RPS13P62277 151 aaKnown RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 KLC1Q07866 573 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 CSTF3Q12996 717 aaKnown RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 TUBB8Q3ZCM7 444 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 MINDY4Q4G0A6 757 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 AGBL2Q5U5Z8 902 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 IRAK1BP1Q5VVH5 260 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 LETMD1Q6P1Q0 360 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 ABHD17CQ6PCB6 329 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 CYP20A1Q6UW02 462 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 VN1R5Q7Z5H4 357 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 MRGPREQ86SM8 312 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 NUDT13Q86X67 352 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 NUDCD3Q8IVD9 361 aa8.64□□□□□ -1.03
NUP54-207ENST00000508583 ZC3H7AQ8IWR0 971 aaKnown RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 ZCCHC7Q8N3Z6 543 aaKnown RBP8.64□□□□□ -1.03
NUP54-207ENST00000508583 CDYL2Q8N8U2 506 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms