RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 SDR42E2A6NKP2 422 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 B4E171 279 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 H7C0S8 307 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 IFRD1O00458 451 aaPredicted RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 BTN3A3O00478 584 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 BTN3A1O00481 513 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 POLR1CO15160 346 aaPredicted RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 NKX2-8O15522 239 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 URI1O94763 535 aaPredicted RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 TMEM63AO94886 807 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 AP2A2O94973 939 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 C9P02748 559 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 OR56A5P0C7T3 313 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 EBLN1P0CF75 366 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 PVRP15151 417 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 ACADLP28330 430 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 TSPAN7P41732 249 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 NSG1P42857 185 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 PRLHRP49683 370 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 KPNA2P52292 529 aaKnown RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 EIF3BP55884 814 aaKnown RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 ACVR1Q04771 509 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 HSPA14Q0VDF9 509 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 MALLQ13021 153 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 EIF3IQ13347 325 aaKnown RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 LAMB3Q13751 1172 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 BOP1Q14137 746 aaKnown RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 LY6DQ14210 128 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 KCNJ11Q14654 390 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 PPP1R7Q15435 360 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 CYP1B1Q16678 543 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 CLPPQ16740 277 aaPredicted RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 ANKRD20A4Q4UJ75 823 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 SYTL3Q4VX76 610 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 DNTTIP2Q5QJE6 756 aaKnown RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 MANEAQ5SRI9 462 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 PRAMEF17Q5VTA0 474 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 LYPLAL1Q5VWZ2 237 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 PTRHD1Q6GMV3 140 aaKnown RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 PWWP2BQ6NUJ5 590 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 NEPROQ6NW34 567 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 LRRC8BQ6P9F7 803 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 ZNF449Q6P9G9 518 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 AFTPHQ6ULP2 937 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 NLRP9Q7RTR0 991 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 TRIM73Q86UV7 250 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 RASGRP3Q8IV61 690 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 CACNA2D3Q8IZS8 1091 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 AVL9Q8NBF6 648 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 SIDT2Q8NBJ9 832 aaKnown RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 CLRN3Q8NCR9 226 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 SPATA3Q8NHX4 192 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 ACTRT1Q8TDG2 376 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 HEXDCQ8WVB3 486 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 CPT1BQ92523 772 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 NAP1L3Q99457 506 aaPredicted RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 KIFC1Q9BW19 673 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 TRIM31Q9BZY9 425 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 SPRY4Q9C004 299 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 IL22Q9GZX6 179 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 DDX47Q9H0S4 455 aaKnown RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 KIR3DX1Q9H7L2 352 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 DMRT3Q9NQL9 472 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 FBXO8Q9NRD0 319 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 TREX1Q9NSU2 369 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 POT1Q9NUX5 634 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 SPHK1Q9NYA1 384 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 IL17BQ9UHF5 180 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 ZNF180Q9UJW8 692 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 PILRAQ9UKJ1 303 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 RUVBL2Q9Y230 463 aaKnown RBP4.37□□□□□ -1.71
NUP54-206ENST00000508465 KLHL20Q9Y2M5 609 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 CRYL1Q9Y2S2 319 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 MAD1L1Q9Y6D9 718 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.37□□□□□ -1.71
NUP54-206ENST00000508465 COLEC10Q9Y6Z7 277 aa4.37□□□□□ -1.71
NUP54-206ENST00000508465 SMG1Q96Q15 3661 aaKnown RBP4.36□□□□□ -1.71
NUP54-206ENST00000508465 C17orf113A0A1B0GUU1 675 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 SLC5A10A0PJK1 596 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 CTAGE9A4FU28 777 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 OR5K3A6NET4 321 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 FAM171A2A8MVW0 826 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 TARM1B6A8C7 271 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 STMND1H3BQB6 276 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 K7ENP7 123 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 HCRTR1O43613 425 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 RAD1O60671 282 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 NIPSNAP2O75323 286 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 SPAG6O75602 509 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 STK17BO94768 372 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 KIAA0754O94854 1291 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 HAUS5O94927 633 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 FTH1P02794 183 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 ERVK-10P10266 1014 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 PRKAR1AP10644 381 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 LIPCP11150 499 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 LIFP15018 202 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 ST6GAL1P15907 406 aa4.36□□□□□ -1.71
NUP54-206ENST00000508465 NELFEP18615 380 aaKnown RBP4.36□□□□□ -1.71
NUP54-206ENST00000508465 TPSB2P20231 275 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms