RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 RBPJQ06330 500 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 SLBPQ14493 270 aaKnown RBP eCLIP12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 PRAMEF9Q5VWM5 478 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 GALNTL5Q7Z4T8 443 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 VN1R5Q7Z5H4 357 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 RPS19BP1Q86WX3 136 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 ZNF227Q86WZ6 799 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 SCUBE1Q8IWY4 988 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 CYP4X1Q8N118 509 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 ARMC10Q8N2F6 343 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 SPATA6LQ8N4H0 392 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 PDLIM2Q96JY6 352 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 GPR137Q96N19 417 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 RHBGQ9H310 441 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 TRIM45Q9H8W5 580 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 LRFN1Q9P244 771 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 RNF14Q9UBS8 474 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 SUCOQ9UBS9 1254 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 TINAGQ9UJW2 476 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 CLDN16Q9Y5I7 305 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 KLF2Q9Y5W3 355 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 TACC2O95359 2948 aa12.17□□□□□ -0.46
HMGCS1-205ENST00000508319 TCRBV9S1A1TA0A576 114 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 ARHGAP10A1A4S6 786 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 LRIT2A6NDA9 550 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 TGFBR3LH3BV60 316 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 CDK2AP1O14519 115 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 TAPBPO15533 448 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 PHGDHO43175 533 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 HNRNPRO43390 633 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 ERI3O43414 337 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 NME2P1O60361 137 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 NME2P22392 152 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 GSTM2P28161 218 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 GRNP28799 593 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 TRHRP34981 398 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 HNRNPFP52597 415 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 MLF1P58340 268 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 STXBP1P61764 594 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 ALDH6A1Q02252 535 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 ART3Q13508 389 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 C3AR1Q16581 482 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 ADPRMQ3LIE5 342 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 FBXO48Q5FWF7 155 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 ADNP2Q6IQ32 1131 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 SLC25A25Q6KCM7 469 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 MTFR2Q6P444 385 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 TMIGD1Q6UXZ0 262 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 ZNF808Q8N4W9 903 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 HORMAD2Q8N7B1 307 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 APCDD1LQ8NCL9 501 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 BBOF1Q8ND07 529 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 TMEM52Q8NDY8 209 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 TTLQ8NG68 377 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 PYROXD1Q8WU10 500 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 MS4A6EQ96DS6 147 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 GPR22Q99680 433 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 RBBP8Q99708 897 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 DPH5Q9H2P9 285 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 SAYSD1Q9NPB0 183 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 WWOXQ9NZC7 414 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 GPRC5BQ9NZH0 403 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 GRHL1Q9NZI5 618 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 WHRNQ9P202 907 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 ZNF835Q9Y2P0 537 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 MMACHCQ9Y4U1 282 aa12.16□□□□□ -0.46
HMGCS1-205ENST00000508319 A8MUA0 341 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 NPIPA5E9PKD4 350 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 EIF3HO15372 352 aaKnown RBP eCLIP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 RAD51CO43502 376 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 CLEC3AO75596 197 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 MYO1DO94832 1006 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 CCDC166P0CW27 439 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 CD1DP15813 335 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 CD22P20273 847 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 GGT5P36269 586 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 CYB561P49447 251 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 SLC12A2P55011 1212 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 BTN3A2P78410 334 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 ADORA2A-AS1P86434 159 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 ILF2Q12905 390 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 RUNX2Q13950 521 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 TERF2Q15554 542 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 OR4D1Q15615 310 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 ZKSCAN8Q15776 578 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 KRTCAP3Q53RY4 240 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 RNFT1Q5M7Z0 435 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 SP5Q6BEB4 398 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 RPTNQ6XPR3 784 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 BNC2Q6ZN30 1099 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 Q6ZPB1 254 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 MRGPRGQ86SM5 289 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 CHERPQ8IWX8 916 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 TCAIMQ8N3R3 496 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 CPSF7Q8N684 471 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 FAM98AQ8NCA5 519 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 ARMC2Q8NEN0 867 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 B3GNT7Q8NFL0 401 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms