RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 RAP1AP62834 184 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 RBX1P62877 108 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 GTF2IP78347 998 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 FPGSQ05932 587 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 MAD2L1Q13257 205 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 BIKQ13323 160 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 FASTKQ14296 549 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 HABP2Q14520 560 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 RAB12Q6IQ22 244 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 WDR73Q6P4I2 378 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 BRINP3Q76B58 766 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 SLC51AQ86UW1 340 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 LDHDQ86WU2 507 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 NRSN1Q8IZ57 195 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 SVBPQ8N300 66 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 RNF148Q8N7C7 305 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 SETD9Q8NE22 299 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 FAM46DQ8NEK8 389 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 ZNF555Q8NEP9 628 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 IL17REQ8NFR9 667 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 OR9A2Q8NGT5 310 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 OR14A16Q8NHC5 309 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 CEP76Q8TAP6 659 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 COQ10AQ96MF6 247 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 H2AFJQ9BTM1 129 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 HTATIP2Q9BUP3 242 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 SORBS1Q9BX66 1292 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 PRDM13Q9H4Q3 707 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 ZBTB20Q9HC78 741 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 IL26Q9NPH9 171 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 GPRC5CQ9NQ84 441 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 CACNA2D2Q9NY47 1150 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 HCN3Q9P1Z3 774 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 POMT2Q9UKY4 750 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 OGDHLQ9ULD0 1010 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 RNF6Q9Y252 685 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 CHD5Q8TDI0 1954 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 BAZ2AQ9UIF9 1905 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 HSPA12AO43301 675 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 DIRAS3O95661 229 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 CFDP00746 253 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 LPLP06858 475 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 ANXA5P08758 320 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 EFNA1P20827 205 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 CCR1P32246 355 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 FEN1P39748 380 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 MEF2AQ02078 507 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 ELAVL2Q12926 359 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 PCLAFQ15004 111 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 ALG11Q2TAA5 492 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 SLC9B1Q4ZJI4 515 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 ZNF805Q5CZA5 627 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 FAM199XQ6PEV8 388 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 BAIAP2L2Q6UXY1 529 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 C3P1Q6ZMU1 363 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 CHMP1BQ7LBR1 199 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 SLC46A3Q7Z3Q1 461 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 TMEM17Q86X19 198 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 FAM178BQ8IXR5 827 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 NIM1KQ8IY84 436 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 KATNAL2Q8IYT4 538 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 SLC44A3Q8N4M1 653 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 C10orf53Q8N6V4 93 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 XAGE5Q8WWM1 108 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 LARP4BQ92615 738 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 ZNF845Q96IR2 970 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 FCRL4Q96PJ5 515 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 TEX12Q9BXU0 123 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 SLC29A3Q9BZD2 475 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 SAP130Q9H0E3 1048 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 REEP4Q9H6H4 257 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 SMURF1Q9HCE7 757 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 TAS2R10Q9NYW0 307 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 MUTYHQ9UIF7 546 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 MRPS18CQ9Y3D5 142 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 NPTNQ9Y639 398 aa10.41□□□□□ -0.74
PDLIM5-210ENST00000508216 MEX3AA1L020 520 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 E9PI62 339 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 NRP1O14786 923 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 LY86O95711 162 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 FTLP02792 175 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 HMGCRP04035 888 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 PSMB9P28065 219 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 S100A11P31949 105 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 MPIP34949 423 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 MAPK9P45984 424 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 CSNK1DP48730 415 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 CSNK1EP49674 416 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 ARSEP51690 589 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 POU4F1Q01851 419 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 LRRC41Q15345 812 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 TBCEQ15813 527 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 TIMM50Q3ZCQ8 353 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 PRAMEF19Q5SWL8 479 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 HEPHL1Q6MZM0 1159 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 TMPRSS11AQ6ZMR5 421 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 CYS1Q717R9 158 aa10.4□□□□□ -0.74
PDLIM5-210ENST00000508216 P4HA3Q7Z4N8 544 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms