RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 PLEKHM1Q9Y4G2 1056 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 TESMINQ9Y4I5 508 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 SOBPA7XYQ1 873 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 H7BY64 318 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 TOR1BO14657 336 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 SEMG1P04279 462 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 FURINP09958 794 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 PTGER1P34995 402 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 SEC13P55735 322 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 DPTQ07507 201 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 CDK5R2Q13319 367 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 CYP2A13Q16696 494 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 IQCCQ4KMZ1 466 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 PRAMEF14Q5SWL7 426 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 PRAMEF13Q5VWM6 474 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 PNCKQ6P2M8 343 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 TMIGD1Q6UXZ0 262 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 EIF3MQ7L2H7 374 aaKnown RBP13.88□□□□□ -0.19
DDX41-208ENST00000507955 RNF130Q86XS8 419 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 LAS2Q8IYD9 372 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 ANKRD53Q8N9V6 530 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 ATG16L2Q8NAA4 619 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 PPP1R16AQ96I34 528 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 C7orf34Q96L11 122 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 PRAP1Q96NZ9 151 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 F2RL3Q96RI0 385 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 SLC6A16Q9GZN6 736 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 XKR8Q9H6D3 395 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 SNX8Q9Y5X2 465 aa13.88□□□□□ -0.19
DDX41-208ENST00000507955 PRAMEF25A6NGN4 478 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 J3KTA2 159 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 CD6P30203 668 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 SOAT1P35610 550 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 CDK3Q00526 305 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 EMX1Q04741 257 aaPredicted RBP13.87□□□□□ -0.19
DDX41-208ENST00000507955 E2F2Q14209 437 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 KLHDC8AQ8IYD2 350 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 NFKBIDQ8NI38 313 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 PHOSPHO2Q8TCD6 241 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 FAR1Q8WVX9 515 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 PPCDCQ96CD2 204 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 MAGED4Q96JG8 741 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 NODALQ96S42 347 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 NEURL2Q9BR09 285 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 EFCAB11Q9BUY7 163 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 ALOXE3Q9BYJ1 711 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 OSGEPL1Q9H4B0 414 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 TM9SF3Q9HD45 589 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 THUMPD1Q9NXG2 353 aaKnown RBP13.87□□□□□ -0.19
DDX41-208ENST00000507955 BTNL2Q9UIR0 455 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 YBX2Q9Y2T7 364 aaKnown RBP13.87□□□□□ -0.19
DDX41-208ENST00000507955 SNX11Q9Y5W9 270 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 A0A1W2PP55 124 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 LINC01565O15544 149 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 KAT7O95251 611 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 RRM2P31350 389 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
DDX41-208ENST00000507955 BCAP31P51572 246 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 CLCNKAP51800 687 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 CD300CQ08708 224 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 CBX3Q13185 183 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 HIST2H2ACQ16777 129 aaPredicted RBP13.87□□□□□ -0.19
DDX41-208ENST00000507955 HIST2H2AA3Q6FI13 130 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 CCDC71Q8IV32 467 aaPredicted RBP13.87□□□□□ -0.19
DDX41-208ENST00000507955 RUBCNLQ9H714 662 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 RPS6KA6Q9UK32 745 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 ORC6Q9Y5N6 252 aa13.87□□□□□ -0.19
DDX41-208ENST00000507955 SUV39H1O43463 412 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 PORP16435 677 aaPredicted RBP13.86□□□□□ -0.19
DDX41-208ENST00000507955 IL1RNP18510 177 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 ITIH1P19827 911 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 ALDH4A1P30038 563 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 SLC19A1P41440 591 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 MAP2K4P45985 399 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 ALDH9A1P49189 494 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 DGKEP52429 567 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 RAD23AP54725 363 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 PHEXP78562 749 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 PCDH1Q08174 1060 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 CAMK2GQ13555 558 aaPredicted RBP13.86□□□□□ -0.19
DDX41-208ENST00000507955 TMEM52BQ4KMG9 183 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 KDM4DQ6B0I6 523 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 AMER3Q8N944 861 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 FBLIM1Q8WUP2 373 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 SH3YL1Q96HL8 342 aaPredicted RBP13.86□□□□□ -0.19
DDX41-208ENST00000507955 INIPQ9NRY2 104 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 RLIMQ9NVW2 624 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 ERVK-18Q9QC07 812 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 GPR34Q9UPC5 381 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 LAMA1P25391 3075 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 KNL1Q8NG31 2342 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 M0QX08 132 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 RNASET2O00584 256 aaKnown RBP13.86□□□□□ -0.19
DDX41-208ENST00000507955 PLPP1O14494 284 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 SLC16A6O15403 523 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 SERPINB7O75635 380 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 TPP2P29144 1249 aaPredicted RBP13.86□□□□□ -0.19
DDX41-208ENST00000507955 DNAJA1P31689 397 aaKnown RBP13.86□□□□□ -0.19
DDX41-208ENST00000507955 C21orf58P58505 322 aa13.86□□□□□ -0.19
DDX41-208ENST00000507955 ZNF33BQ06732 778 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms