RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	PRMT3	O60678	531 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SORBS2	O94875	1100 aa	Known RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TBX6	O95947	436 aa	Predicted RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TGFB1	P01137	390 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CYC1	P08574	325 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ITGAM	P11215	1152 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	COL6A2	P12110	1019 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ICAM2	P13598	275 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	HPD	P32754	393 aa	Predicted RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ARL1	P40616	181 aa	Predicted RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CASP2	P42575	452 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	OR4D2	P58180	307 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	DDX39B	Q13838	428 aa	Known RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	GTF2H2	Q13888	395 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	RUNX2	Q13950	521 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	NAA30	Q147X3	362 aa	Predicted RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.31	□□□□□ -0.28	1e-11	■■■■■ 48
CCHCR1-222	ENST00000507459	TSNAXIP1	Q2TAA8	658 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PRR30	Q53SZ7	412 aa	Predicted RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SFT2D3	Q587I9	215 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	GTF2H2C	Q6P1K8	395 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ADGRD1	Q6QNK2	874 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	GOLGA7	Q7Z5G4	137 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CYP4X1	Q8N118	509 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459		Q8NA96	180 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	OR2L5	Q8NG80	312 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	DNAJB14	Q8TBM8	379 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PSMF1	Q92530	271 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	UBE2E3	Q969T4	207 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	IMMP1L	Q96LU5	166 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TXLNGY	Q9BZA5	131 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CLMP	Q9H6B4	373 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ACTR8	Q9H981	624 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CLK4	Q9HAZ1	481 aa	Known RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TNPO3	Q9Y5L0	923 aa	Known RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SPEN	Q96T58	3664 aa	Known RBP	13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459		A0A088AWK7	358 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	IQANK1	A0A1B0GTG1	560 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459		A8MUI8	341 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SAP18	O00422	153 aa	Known RBP	13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SMIM24	O75264	130 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MAOA	P21397	527 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ZNF10	P21506	573 aa	Predicted RBP	13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CERS1	P27544	350 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	EEF1D	P29692	281 aa	Known RBP	13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TGM3	Q08188	693 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MFAP5	Q13361	173 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	INPP5J	Q15735	1006 aa	Predicted RBP	13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ADPRM	Q3LIE5	342 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CRB2	Q5IJ48	1285 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	GRHL2	Q6ISB3	625 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ABHD17C	Q6PCB6	329 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PAPD4	Q6PIY7	484 aa	Known RBP	13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	IGFL2	Q6UWQ7	119 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	RIPOR1	Q6ZS17	1223 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	LAS2	Q8IYD9	372 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	RNF175	Q8N4F7	328 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CISD2	Q8N5K1	135 aa	Known RBP	13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	OR7G3	Q8NG95	312 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ZNF473	Q8WTR7	871 aa	Known RBP	13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ATP6V1E2	Q96A05	226 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MIB2	Q96AX9	1013 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	LMF1	Q96S06	567 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	LPAR4	Q99677	370 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	WDR77	Q9BQA1	342 aa	Predicted RBP	13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CCDC77	Q9BR77	488 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MS4A8	Q9BY19	250 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	EPB41L4B	Q9H329	900 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	IPPK	Q9H8X2	491 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PLA2G3	Q9NZ20	509 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TBK1	Q9UHD2	729 aa		13.3	□□□□□ -0.28
CCHCR1-222	ENST00000507459		A8MUA0	341 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	GOLGA8R	I6L899	631 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	RTCA	O00442	366 aa	Known RBP	13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	E2F3	O00716	465 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	F10	P00742	488 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MTTP	P55157	894 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	AP2B1	P63010	937 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ARG2	P78540	354 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PCDH1	Q08174	1060 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	E2F2	Q14209	437 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	LIPJ	Q5W064	366 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PLAG1	Q6DJT9	500 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TIFAB	Q6ZNK6	161 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	QSOX2	Q6ZRP7	698 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459		Q6ZS92	163 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CHSY3	Q70JA7	882 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CUZD1	Q86UP6	607 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ATCAY	Q86WG3	371 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	IQCK	Q8N0W5	287 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	FAM47B	Q8NA70	645 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CATSPER1	Q8NEC5	780 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	HUS1B	Q8NHY5	278 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PPP4R1	Q8TF05	950 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MTBP	Q96DY7	904 aa		13.29	□□□□□ -0.28
CCHCR1-222	ENST00000507459	QRFPR	Q96P65	431 aa		13.29	□□□□□ -0.28

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