RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CCNYL1Q8N7R7 359 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 GALNT6Q8NCL4 622 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 ZNF740Q8NDX6 193 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 OR52B6Q8NGF0 335 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 SELENOMQ8WWX9 145 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 STARD8Q92502 1023 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 CCT6BQ92526 530 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 TANKQ92844 425 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 TBC1D20Q96BZ9 403 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 ERP27Q96DN0 273 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 FER1L6-AS2Q96M78 137 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 GATA5Q9BWX5 397 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 UNKQ9C0B0 810 aaKnown RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 SPRTNQ9H040 489 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 WDR41Q9HAD4 459 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 MID1IP1Q9NPA3 183 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 SEMA4BQ9NPR2 832 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 RIC8BQ9NVN3 520 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 TMEM45AQ9NWC5 275 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 EHD3Q9NZN3 535 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 PSME2Q9UL46 239 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 TCFL5Q9UL49 500 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 G3BP2Q9UN86 482 aaKnown RBP8.02□□□□□ -1.13
PDGFC-205ENST00000506880 SH2B3Q9UQQ2 575 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 POLHQ9Y253 713 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 SPTA1P02549 2419 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 CNTRLQ7Z7A1 2325 aa8.02□□□□□ -1.13
PDGFC-205ENST00000506880 USP24Q9UPU5 2620 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 CACNA1BQ00975 2339 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 LOC102723996A0A087X1L8 192 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 TEX51A0A1B0GUA7 166 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 FEZF1A0PJY2 475 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ARHGAP10A1A4S6 786 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 TRPC5OSA6NMA1 111 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 MAGEB17A8MXT2 336 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 MANBAO00462 879 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ERI3O43414 337 aaKnown RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 TLX3O43711 291 aaPredicted RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 PRAMEF4O60810 478 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 SNNO75324 88 aaPredicted RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 SPAG7O75391 227 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 MYO1DO94832 1006 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 BMP10O95393 424 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 TIAF1O95411 115 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 TOP3BO95985 862 aaKnown RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 NTRK1P04629 796 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 EIF2S1P05198 315 aaKnown RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 CAPN1P07384 714 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ZGLP1P0C6A0 271 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 DRD2P14416 443 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 DLSTP36957 453 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ARL1P40616 181 aaPredicted RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ASMTP46597 345 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 RAB38P57729 211 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ABCE1P61221 599 aaKnown RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ACSM2AQ08AH3 577 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 STX3Q13277 289 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 SLC9A5Q14940 896 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 NKG7Q16617 165 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 HKDC1Q2TB90 917 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 DEFB110Q30KQ9 67 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ARL13AQ5H913 290 aaPredicted RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 PRAMEF9Q5VWM5 478 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 KANK2Q63ZY3 851 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ACSM2BQ68CK6 577 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 CCDC81Q6ZN84 652 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 RIPOR1Q6ZS17 1223 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 TIPARPQ7Z3E1 657 aaKnown RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 CUZD1Q86UP6 607 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 MYLK4Q86YV6 388 aaPredicted RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 AMER3Q8N944 861 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 SLC38A9Q8NBW4 561 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 COL26A1Q96A83 441 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 MIEF2Q96C03 454 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 MMABQ96EY8 250 aaPredicted RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 C11orf24Q96F05 449 aaPredicted RBP8.01□□□□□ -1.13
PDGFC-205ENST00000506880 PPP3R2Q96LZ3 170 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 C7orf26Q96N11 449 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 FAIM2Q9BWQ8 316 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 KLHL25Q9H0H3 589 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 CHST8Q9H2A9 424 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ADNPQ9H2P0 1102 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ASIC5Q9NY37 505 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 SLC17A7Q9P2U7 560 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 MCM8Q9UJA3 840 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ZNF225Q9UK10 706 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 CROTQ9UKG9 612 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 DAPP1Q9UN19 280 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 KLHL20Q9Y2M5 609 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 RNF11Q9Y3C5 154 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 TRAF6Q9Y4K3 522 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 ASB1Q9Y576 335 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 FAM208BQ5VWN6 2430 aa8.01□□□□□ -1.13
PDGFC-205ENST00000506880 FRYQ5TBA9 3013 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 C1QTNF9BB2RNN3 333 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 PEX12O00623 359 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 CASC3O15234 703 aaKnown RBP8□□□□□ -1.13
PDGFC-205ENST00000506880 P2RX6O15547 441 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 KLK10O43240 276 aa8□□□□□ -1.13
PDGFC-205ENST00000506880 HCRTR1O43613 425 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms