RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 NPIPB8E9PQR5 432 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 SAP18O00422 153 aaKnown RBP12.16□□□□□ -0.46
TCOF1-210ENST00000506767 CNOT3O75175 753 aaKnown RBP12.16□□□□□ -0.46
TCOF1-210ENST00000506767 DNAJB6O75190 326 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 SH3BGRLO75368 114 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 CRCPO75575 148 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 FBLP22087 321 aaKnown RBP12.16□□□□□ -0.46
TCOF1-210ENST00000506767 F8A1P23610 371 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 ATP5A1P25705 553 aaKnown RBP12.16□□□□□ -0.46
TCOF1-210ENST00000506767 BSGP35613 385 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 SKP1P63208 163 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 BTN3A2P78410 334 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 OCRLQ01968 901 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 TGM3Q08188 693 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 TBL3Q12788 808 aaKnown RBP12.16□□□□□ -0.46
TCOF1-210ENST00000506767 OR4C11Q6IEV9 310 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF793Q6ZN11 406 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 SHISA5Q8N114 240 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 METTL4Q8N3J2 472 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 ARFGAP2Q8N6H7 521 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 IL22RA1Q8N6P7 574 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF781Q8N8C0 355 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 CKAP2Q8WWK9 683 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 ZCCHC14Q8WYQ9 949 aaKnown RBP12.16□□□□□ -0.46
TCOF1-210ENST00000506767 COL26A1Q96A83 441 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 FAR2Q96K12 515 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 HBEGFQ99075 208 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 C17orf62Q9BQA9 187 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 CENPKQ9BS16 269 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 NPLQ9BXD5 320 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-210ENST00000506767 GPR87Q9BY21 358 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 ACPTQ9BZG2 426 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 TGIF2Q9GZN2 237 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 ROGDIQ9GZN7 287 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 ILKAPQ9H0C8 392 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-210ENST00000506767 IFT80Q9P2H3 777 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-210ENST00000506767 VPS29Q9UBQ0 182 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 MAP4K5Q9Y4K4 846 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 CCL27Q9Y4X3 112 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 PCDHGA6Q9Y5G7 932 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 USP24Q9UPU5 2620 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 ASPMQ8IZT6 3477 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 CFAP47Q6ZTR5 3102 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 A0A088AWK7 358 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 A0A0G2JN53 185 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 RTCAO00442 366 aaKnown RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 RDH16O75452 317 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 KLF7O75840 302 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 CD63P08962 238 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 LIFP15018 202 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF10P21506 573 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 HIST1H1TP22492 207 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 PRPH2P23942 346 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 DLSTP36957 453 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 RPL14P50914 215 aaKnown RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 RAP1GDS1P52306 607 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 MTTPP55157 894 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 MAT1AQ00266 395 aaKnown RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 DNASE1L3Q13609 305 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 RUNX2Q13950 521 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 SLC9A5Q14940 896 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 NCF4Q15080 339 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 NKG7Q16617 165 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 SYT16Q17RD7 645 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 AP5B1Q2VPB7 878 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 ARHGAP40Q5TG30 622 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 SCIMPQ6UWF3 145 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 Q6ZSR9 355 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 MED25Q71SY5 747 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 KIRREL3Q8IZU9 778 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 CA13Q8N1Q1 262 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 ZCCHC7Q8N3Z6 543 aaKnown RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 ACOT4Q8N9L9 421 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 OR5T3Q8NGG3 340 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 OR51Q1Q8NH59 317 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 AGR3Q8TD06 166 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 CHTF18Q8WVB6 975 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 TWIST2Q8WVJ9 160 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 C11orf24Q96F05 449 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 NAF1Q96HR8 494 aaKnown RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 MAGEB18Q96M61 343 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 SERINC2Q96SA4 455 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 MRPL1Q9BYD6 325 aaKnown RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 DDX31Q9H8H2 851 aaKnown RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 WDR54Q9H977 334 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 MKKSQ9NPJ1 570 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 NMRK1Q9NWW6 199 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 SIRT5Q9NXA8 310 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF282Q9UDV7 671 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 ADAM29Q9UKF5 820 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 SLC12A4Q9UP95 1085 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 FARSAQ9Y285 508 aaKnown RBP12.15□□□□□ -0.46
TCOF1-210ENST00000506767 FIS1Q9Y3D6 152 aa12.15□□□□□ -0.46
TCOF1-210ENST00000506767 SEC16AO15027 2179 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 ZNF860A6NHJ4 632 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 C9J4A7 227 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 SLC28A1O00337 649 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 KLK10O43240 276 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 EFSO43281 561 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 CHST10O43529 356 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms