RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 HNRNPA0Q13151 305 aaKnown RBP16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 DDI2Q5TDH0 399 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 C11orf65Q8NCR3 313 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 SPON2Q9BUD6 331 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 ACER3Q9NUN7 267 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 NDRG2Q9UN36 371 aaKnown RBP16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 CORO2BQ9UQ03 480 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 SERTM1A2A2V5 107 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 PLD2O14939 933 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 OPN1SWP03999 348 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 ANXA5P08758 320 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 C1SP09871 688 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 LAMP1P11279 417 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 SRCP12931 536 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 POU3F3P20264 500 aaPredicted RBP16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 SSTR4P31391 388 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 HMGA2P52926 109 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 ZXDCQ2QGD7 858 aaPredicted RBP16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 MEDAGQ5VYS4 303 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 SPRYD7Q5W111 196 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 FAM205BPQ63HN1 556 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 FRMPD2BQ6IN97 320 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 GLCCI1Q86VQ1 547 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 PHC2Q8IXK0 858 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 RBFAQ8N0V3 343 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 SLC34A3Q8N130 599 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 NAGSQ8N159 534 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 FAM46DQ8NEK8 389 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 TMEM80Q96HE8 168 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 SUSD3Q96L08 255 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 FAM193BQ96PV7 902 aaPredicted RBP16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 MND1Q9BWT6 205 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 TXNL4BQ9NX01 149 aaKnown RBP16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 PCDH7O60245 1069 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 HCN1O60741 890 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 PRAMEF12O95522 483 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 PPIBP23284 216 aaKnown RBP16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 CRISP1P54107 249 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 C21orf58P58505 322 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 RRAS2P62070 204 aaPredicted RBP16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 MLLT11Q13015 90 aaPredicted RBP16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 ZBTB37Q5TC79 503 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 FAAH2Q6GMR7 532 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 SDE2Q6IQ49 451 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 KLHL17Q6TDP4 642 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 NANOGP1Q8N7R0 232 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 L3MBTL4Q8NA19 623 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 SH3KBP1Q96B97 665 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 OMA1Q96E52 524 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 SAMD11Q96NU1 681 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 COPS8Q99627 209 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 KATNAL1Q9BW62 490 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 LATS2Q9NRM7 1088 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 GLTPQ9NZD2 209 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 SLC45A1Q9Y2W3 748 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 AUP1Q9Y679 476 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 PIKFYVEQ9Y2I7 2098 aa16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 TDRD15B5MCY1 1934 aaKnown RBP16.4■□□□□ 0.22
SQSTM1-211ENST00000506690 LINC00862A6NCI5 91 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 UPK3BL1B0FP48 263 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 UPK3BL2E5RIL1 263 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 F8W810 466 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 SMLR1H3BR10 107 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 AGRPO00253 132 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 PITPNM1O00562 1244 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 GAPDHSO14556 408 aaPredicted RBP16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 CLEC2LP0C7M8 214 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 TYMPP19971 482 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 HMGCLP35914 325 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 MAPK12P53778 367 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 CLDN20P56880 219 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 TAGLNQ01995 201 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 RING1Q06587 406 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 MAB21L1Q13394 359 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 NCF4Q15080 339 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 ZNF628Q5EBL2 1059 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 C10orf120Q5SQS8 335 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 C2orf69Q8N8R5 385 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 ATP6V1C2Q8NEY4 427 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 KLHL6Q8WZ60 621 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 ZBED6CLQ96FA7 236 aaPredicted RBP16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 TINF2Q9BSI4 451 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 POLR2J2Q9GZM3 115 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 TRIM45Q9H8W5 580 aaPredicted RBP16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 MCUBQ9NWR8 336 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 FLRT1Q9NZU1 646 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 F5H5T6 163 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 J3KTA2 159 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 MYL12BO14950 172 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 PDPK1O15530 556 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 CELF2O95319 508 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 GSTM1P09488 218 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 MYL12AP19105 171 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 MAN2A2P49641 1150 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 SNRPGP62308 76 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 FKBP1BP68106 108 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 DGKKQ5KSL6 1271 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 CDKL4Q5MAI5 379 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 RNLSQ5VYX0 342 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms