RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 IQCGQ9H095 443 aaKnown RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 ING2Q9H160 280 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 ADNPQ9H2P0 1102 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 SPNS1Q9H2V7 528 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 SOX17Q9H6I2 414 aaPredicted RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 NOL11Q9H8H0 719 aaKnown RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 CTSFQ9UBX1 484 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 TUBD1Q9UJT1 453 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 ASB1Q9Y576 335 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 ANKRD11Q6UB99 2663 aaPredicted RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 TPRP12270 2363 aaKnown RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 MAP1BP46821 2468 aaKnown RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 APC2O95996 2303 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 A6NHS1 94 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 LRRC14BA6NHZ5 514 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 ARGFXA6NJG6 315 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 A8MT66 165 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 H0YIV9 168 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 AGPSO00116 658 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 PSMD12O00232 456 aaPredicted RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 PRAMEF4O60810 478 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 CNOT3O75175 753 aaKnown RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 SUPT7LO94864 414 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 BMP10O95393 424 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 OTCP00480 354 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 UMODP07911 640 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 FAM87AP0C7U9 286 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 ZNF888P0CJ79 500 aaPredicted RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 SMIM10L1P0DMW3 83 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 MYL2P10916 166 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 PTX3P26022 381 aaPredicted RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 PIK3CBP42338 1070 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 XCR1P46094 333 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 CCL11P51671 97 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 PRKAA2P54646 552 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 NAA20P61599 178 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 HERVK_113P63132 956 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 BTN3A2P78410 334 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 HYAL2Q12891 473 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 KCNAB2Q13303 367 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 RCN2Q14257 317 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 RBBP7Q16576 425 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 CPSF6Q16630 551 aaKnown RBP eCLIP6.87□□□□□ -1.31
GYPB-206ENST00000506516 SYT16Q17RD7 645 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 TMEM35AQ53FP2 167 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 C10orf62Q5T681 223 aaPredicted RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 FAM69BQ5VUD6 431 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 PRAMEF9Q5VWM5 478 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 TTC19Q6DKK2 380 aaPredicted RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 GRHL2Q6ISB3 625 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 SHISA6Q6ZSJ9 500 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 PRSS41Q7RTY9 318 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 GOLGA7Q7Z5G4 137 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 MILR1Q7Z6M3 343 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 PDSS2Q86YH6 399 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 PRSS58Q8IYP2 241 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 DTWD1Q8N5C7 304 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 AMER3Q8N944 861 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 L3MBTL4Q8NA19 623 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 CCDC63Q8NA47 563 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 CLEC1AQ8NC01 280 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 OR7G3Q8NG95 312 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 NANOS1Q8WY41 292 aaKnown RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 GAL3ST3Q96A11 431 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 MS4A6EQ96DS6 147 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 CMTM7Q96FZ5 175 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 SMIM10Q96HG1 83 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 OR1F2PQ96R84 312 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 SMC6Q96SB8 1091 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 NTMT1Q9BV86 223 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 TMEM109Q9BVC6 243 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 NPLQ9BXD5 320 aaPredicted RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 ERVK-6Q9BXR3 956 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 ROGDIQ9GZN7 287 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 KLHL31Q9H511 634 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 SEMA4BQ9NPR2 832 aaPredicted RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 P4HTMQ9NXG6 502 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 PSD3Q9NYI0 1048 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 MID2Q9UJV3 735 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 C3orf18Q9UK00 162 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 PCTPQ9UKL6 214 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 MKL2Q9ULH7 1088 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 PLAAQ9Y263 795 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 STK38LQ9Y2H1 464 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 MRPS2Q9Y399 296 aaKnown RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 TSC22D4Q9Y3Q8 395 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 KMT2BQ9UMN6 2715 aaPredicted RBP6.87□□□□□ -1.31
GYPB-206ENST00000506516 USP24Q9UPU5 2620 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 LOC400499M0QZD8 3231 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 ACACAQ13085 2346 aa6.87□□□□□ -1.31
GYPB-206ENST00000506516 ITPR1Q14643 2758 aa6.86□□□□□ -1.31
GYPB-206ENST00000506516 PCM1Q15154 2024 aa6.86□□□□□ -1.31
GYPB-206ENST00000506516 IDSB3KWA1 339 aa6.86□□□□□ -1.31
GYPB-206ENST00000506516 FOXE1O00358 373 aaPredicted RBP6.86□□□□□ -1.31
GYPB-206ENST00000506516 OR7A17O14581 309 aa6.86□□□□□ -1.31
GYPB-206ENST00000506516 FFAR3O14843 346 aa6.86□□□□□ -1.31
GYPB-206ENST00000506516 RGS16O15492 202 aaPredicted RBP6.86□□□□□ -1.31
GYPB-206ENST00000506516 GPR42O15529 346 aa6.86□□□□□ -1.31
GYPB-206ENST00000506516 ERI3O43414 337 aaKnown RBP6.86□□□□□ -1.31
GYPB-206ENST00000506516 CHST10O43529 356 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms