RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 DDX47Q9H0S4 455 aaKnown RBP5.29□□□□□ -1.56
CHD1-204ENST00000505982 ABCG4Q9H172 646 aa5.29□□□□□ -1.56
CHD1-204ENST00000505982 SYTL2Q9HCH5 934 aa5.29□□□□□ -1.56
CHD1-204ENST00000505982 SLC52A3Q9NQ40 469 aa5.29□□□□□ -1.56
CHD1-204ENST00000505982 POLKQ9UBT6 870 aa5.29□□□□□ -1.56
CHD1-204ENST00000505982 TRMT6Q9UJA5 497 aaKnown RBP5.29□□□□□ -1.56
CHD1-204ENST00000505982 FOXA2Q9Y261 457 aaPredicted RBP5.29□□□□□ -1.56
CHD1-204ENST00000505982 RPH3AQ9Y2J0 694 aaPredicted RBP5.29□□□□□ -1.56
CHD1-204ENST00000505982 C2CD2Q9Y426 696 aa5.29□□□□□ -1.56
CHD1-204ENST00000505982 BLMP54132 1417 aaPredicted RBP5.29□□□□□ -1.56
CHD1-204ENST00000505982 EPRSP07814 1512 aaKnown RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 CDK13Q14004 1512 aaKnown RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 NPHP3Q7Z494 1330 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 SCN5AQ14524 2016 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 LAMC1P11047 1609 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 TRPM1Q7Z4N2 1603 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 EIF2AK4Q9P2K8 1649 aaKnown RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 A0A087WUV0 522 aaPredicted RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 SLC15A5A6NIM6 579 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 CHUKO15111 745 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 TEX28O15482 410 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 PSMD3O43242 534 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 MT-ND2P03891 347 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 ALPPP05187 535 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 PTMAP06454 111 aaKnown RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 HMBSP08397 361 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 ALPPL2P10696 532 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 KRT3P12035 628 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 RPL35AP18077 110 aaKnown RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 ELAVL4P26378 380 aaKnown RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 CLK1P49759 484 aaKnown RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 DLX5P56178 289 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 HUNKP57058 714 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 KCNK10P57789 538 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 DCDC1P59894 354 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 PDK1Q15118 436 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 KRT31Q15323 416 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 PTPN14Q15678 1187 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 C17orf107Q6ZR85 190 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 CENPQQ7L2Z9 268 aaPredicted RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 C5orf24Q7Z6I8 188 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 SMIM29Q86T20 159 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 TMEM99Q8N816 258 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 CCNYQ8ND76 341 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 SAP25Q8TEE9 199 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 APOBEC4Q8WW27 367 aaKnown RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 HAS2Q92819 552 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 WBP2Q969T9 261 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 TBC1D31Q96DN5 1066 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 DTD2Q96FN9 168 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 NAP1L5Q96NT1 182 aaPredicted RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 NECTIN4Q96NY8 510 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 UHRF2Q96PU4 802 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 TSPYL1Q9H0U9 437 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 C1orf21Q9H246 121 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 GPN1Q9HCN4 374 aaPredicted RBP5.28□□□□□ -1.56
CHD1-204ENST00000505982 UBQLN2Q9UHD9 624 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 FBXL4Q9UKA2 621 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 SATB2Q9UPW6 733 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 KIAA1107Q9UPP5 1409 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 INSRP06213 1382 aa5.28□□□□□ -1.56
CHD1-204ENST00000505982 PZPP20742 1482 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 RAD54L2Q9Y4B4 1467 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 MTMR11A4FU01 709 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 CCDC69A6NI79 296 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 ZNF732B4DXR9 585 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 ERVV-2B6SEH9 535 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 TLR4O00206 839 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 BMPR1BO00238 502 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 CYTIPO60759 359 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 B3GALNT1O75752 331 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 KRT33AO76009 404 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 SEC24AO95486 1093 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 CHRNGP07510 517 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 NUDT17P0C025 328 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 FAM157CP0CG43 387 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 AREGP15514 252 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 ZNF18P17022 549 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 AHCYP23526 432 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 CTNNA2P26232 953 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 MAP2K2P36507 400 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 LINC01547P58512 204 aaPredicted RBP5.27□□□□□ -1.57
CHD1-204ENST00000505982 STARD6P59095 220 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 TMEM132DQ14C87 1099 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 LRRC37A5PQ49AS3 106 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 TOR1AIP1Q5JTV8 583 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 SLC27A4Q6P1M0 643 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 C15orf52Q6ZUT6 534 aaKnown RBP5.27□□□□□ -1.57
CHD1-204ENST00000505982 TRMT11Q7Z4G4 463 aaKnown RBP5.27□□□□□ -1.57
CHD1-204ENST00000505982 ANKRD20A12PQ8NF67 263 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 SPATA18Q8TC71 538 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 ARHGAP45Q92619 1136 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 LMLNQ96KR4 655 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 C10orf90Q96M02 699 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 PIGQQ9BRB3 760 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 KRT23Q9C075 422 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 XPO4Q9C0E2 1151 aaKnown RBP5.27□□□□□ -1.57
CHD1-204ENST00000505982 TXLNGQ9NUQ3 528 aa5.27□□□□□ -1.57
CHD1-204ENST00000505982 ELF5Q9UKW6 265 aaPredicted RBP5.27□□□□□ -1.57
CHD1-204ENST00000505982 POMT2Q9UKY4 750 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms