RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ZNF740Q8NDX6 193 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 OR9A4Q8NGU2 314 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 TRPC4APQ8TEL6 797 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 ZNF473Q8WTR7 871 aaKnown RBP9.32□□□□□ -0.92
NR1I3-220ENST00000505005 MS4A6EQ96DS6 147 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 L3HYPDHQ96EM0 354 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 AGAP4Q96P64 663 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 LMF1Q96S06 567 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 LPAR4Q99677 370 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 CCT7Q99832 543 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 PELOQ9BRX2 385 aaKnown RBP9.32□□□□□ -0.92
NR1I3-220ENST00000505005 SLC29A3Q9BZD2 475 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 UNKQ9C0B0 810 aaKnown RBP9.32□□□□□ -0.92
NR1I3-220ENST00000505005 LHPPQ9H008 270 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 NOL11Q9H8H0 719 aaKnown RBP9.32□□□□□ -0.92
NR1I3-220ENST00000505005 AKIRIN1Q9H9L7 192 aaPredicted RBP9.32□□□□□ -0.92
NR1I3-220ENST00000505005 SSU72Q9NP77 194 aaKnown RBP9.32□□□□□ -0.92
NR1I3-220ENST00000505005 MED4Q9NPJ6 270 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 LYARQ9NX58 379 aaKnown RBP9.32□□□□□ -0.92
NR1I3-220ENST00000505005 TRPS1Q9UHF7 1281 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 ADAM29Q9UKF5 820 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 PSME2Q9UL46 239 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 WBP11Q9Y2W2 641 aaKnown RBP9.32□□□□□ -0.92
NR1I3-220ENST00000505005 MRPS18BQ9Y676 258 aaKnown RBP9.32□□□□□ -0.92
NR1I3-220ENST00000505005 ASPMQ8IZT6 3477 aa9.32□□□□□ -0.92
NR1I3-220ENST00000505005 ARGFXA6NJG6 315 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 A8MT66 165 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 ULK1O75385 1050 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 CRCPO75575 148 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 SCELO95171 688 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 CHEK2O96017 543 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 RPS17P08708 135 aaKnown RBP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 ZNF888P0CJ79 500 aaPredicted RBP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 COX7A2P14406 83 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 CPA3P15088 417 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 IL1RNP18510 177 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 CCL11P51671 97 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 PGGT1BP53609 377 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 RAB38P57729 211 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 RPS18P62269 152 aaKnown RBP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 BTN3A2P78410 334 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 GALNT1Q10472 559 aaPredicted RBP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 KLRB1Q12918 225 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 LCP2Q13094 533 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 NSDHLQ15738 373 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 LINC00303Q3SY05 128 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 MINDY4Q4G0A6 757 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 FRG2Q64ET8 278 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 OR4C11Q6IEV9 310 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 ABHD17CQ6PCB6 329 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 COX15Q7KZN9 410 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 SAMD14Q8IZD0 417 aaPredicted RBP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 IQCKQ8N0W5 287 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 PLD6Q8N2A8 252 aaKnown RBP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 ZCCHC7Q8N3Z6 543 aaKnown RBP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 ZADH2Q8N4Q0 377 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 HORMAD2Q8N7B1 307 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 GOLGA6L1Q8N7Z2 621 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 AMER3Q8N944 861 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 ZCCHC10Q8TBK6 192 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 M1APQ8TC57 530 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 TANKQ92844 425 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 CNDP1Q96KN2 507 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 ART5Q96L15 291 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 FRG2BQ96QU4 278 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 ZNF382Q96SR6 550 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 SMAD5Q99717 465 aaKnown RBP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 MS4A8Q9BY19 250 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 EPB41L4BQ9H329 900 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 SOX17Q9H6I2 414 aaPredicted RBP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 SLC22A11Q9NSA0 550 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.31□□□□□ -0.92
NR1I3-220ENST00000505005 TMEM216Q9P0N5 145 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 PCTPQ9UKL6 214 aa9.31□□□□□ -0.92
NR1I3-220ENST00000505005 SERTM1A2A2V5 107 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 B8ZZF3 427 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 SGK494L7N484 410 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 TM9SF1O15321 606 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 P2RX6O15547 441 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 CHST10O43529 356 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 TRIM13O60858 407 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 SERPINA7P05543 415 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 UMODP07911 640 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 WT1P19544 449 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-220ENST00000505005 HIST1H1TP22492 207 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-220ENST00000505005 ITGA3P26006 1051 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 HMOX2P30519 316 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 SSR2P43308 183 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 SLCO1A2P46721 670 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 TRA2BP62995 288 aaKnown RBP9.3□□□□□ -0.92
NR1I3-220ENST00000505005 CYP4F2P78329 520 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 CSTF3Q12996 717 aaKnown RBP9.3□□□□□ -0.92
NR1I3-220ENST00000505005 IL10RAQ13651 578 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 CPSF6Q16630 551 aaKnown RBP eCLIP9.3□□□□□ -0.92
NR1I3-220ENST00000505005 KRT71Q3SY84 523 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 VWA2Q5GFL6 755 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 CRB2Q5IJ48 1285 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 ZNF678Q5SXM1 525 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 LIPMQ5VYY2 423 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms