RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TGFBIQ15582 683 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 ZKSCAN8Q15776 578 aaPredicted RBP12.31□□□□□ -0.44
DDX41-204ENST00000504807 ABHD17BQ5VST6 288 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 NKAPQ8N5F7 415 aaKnown RBP12.31□□□□□ -0.44
DDX41-204ENST00000504807 ELP5Q8TE02 316 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 ATL1Q8WXF7 558 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 RUNDC3BQ96NL0 473 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 OR1F2PQ96R84 312 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 MDFIQ99750 246 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 TSPAN10Q9H1Z9 355 aaPredicted RBP12.31□□□□□ -0.44
DDX41-204ENST00000504807 RHBGQ9H310 441 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 KCNK13Q9HB14 408 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 GPAMQ9HCL2 828 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 MMP25Q9NPA2 562 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 CTNNAL1Q9UBT7 734 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 ZNF223Q9UK11 482 aaPredicted RBP12.31□□□□□ -0.44
DDX41-204ENST00000504807 ZNF490Q9ULM2 529 aaPredicted RBP12.31□□□□□ -0.44
DDX41-204ENST00000504807 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDX41-204ENST00000504807 SCN2AQ99250 2005 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 JMJD1CQ15652 2540 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 MYOCOSA0A1B0GUC4 107 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 TCRBV16S1A1N1A0A5B0 115 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 TMEM200CA6NKL6 621 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 NEURL1O76050 574 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 UNC5CO95185 931 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 CYC1P08574 325 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 C1GALT1C1LP0DN25 315 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 CD1DP15813 335 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 PAFAH1B1P43034 410 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 AGTR2P50052 363 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 NR0B1P51843 470 aaKnown RBP12.3□□□□□ -0.44
DDX41-204ENST00000504807 OR4D2P58180 307 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 ZNF766Q5HY98 468 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 RNFT1Q5M7Z0 435 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 NCCRP1Q6ZVX7 275 aaPredicted RBP12.3□□□□□ -0.44
DDX41-204ENST00000504807 TAOK1Q7L7X3 1001 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 CMC1Q7Z7K0 106 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 ZNF808Q8N4W9 903 aaPredicted RBP12.3□□□□□ -0.44
DDX41-204ENST00000504807 GABPB2Q8TAK5 448 aaPredicted RBP12.3□□□□□ -0.44
DDX41-204ENST00000504807 M1APQ8TC57 530 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 FBXO25Q8TCJ0 367 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 CHTF18Q8WVB6 975 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 ANKRD7Q92527 254 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 RELTQ969Z4 430 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 MS4A6EQ96DS6 147 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 CCDC120Q96HB5 630 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 QRFPRQ96P65 431 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 GPR22Q99680 433 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 RBBP8Q99708 897 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 EGFL8Q99944 293 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 TRIM54Q9BYV2 358 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 DERL2Q9GZP9 239 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 POPDC3Q9HBV1 291 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 KLHL1Q9NR64 748 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 WHRNQ9P202 907 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 SUCOQ9UBS9 1254 aaKnown RBP12.3□□□□□ -0.44
DDX41-204ENST00000504807 DYRK1BQ9Y463 629 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 PCDHGB6Q9Y5F9 930 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 STAB1Q9NY15 2570 aa12.3□□□□□ -0.44
DDX41-204ENST00000504807 HMX2A2RU54 273 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 FAM187AA6NFU0 413 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 GABRR3A8MPY1 467 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 A8MUA0 341 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 C19orf84I3L1E1 186 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 PRKNO60260 465 aaPredicted RBP12.29□□□□□ -0.44
DDX41-204ENST00000504807 RASAL1O95294 804 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 UQCRHP07919 91 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 CCDC166P0CW27 439 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 ICAM2P13598 275 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 TPP2P29144 1249 aaPredicted RBP12.29□□□□□ -0.44
DDX41-204ENST00000504807 HSPA7P48741 367 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 BTN3A2P78410 334 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 CDSNQ15517 529 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 OR1C1Q15619 314 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 C16orf47Q6ZP98 133 aaPredicted RBP12.29□□□□□ -0.44
DDX41-204ENST00000504807 UBE3DQ7Z6J8 389 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 CHERPQ8IWX8 916 aaKnown RBP12.29□□□□□ -0.44
DDX41-204ENST00000504807 RNF175Q8N4F7 328 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 SCMH1Q96GD3 660 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 UBXN10Q96LJ8 280 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 PTCHD1Q96NR3 888 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 CSF3RQ99062 836 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 FAM129AQ9BZQ8 928 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 CDCP1Q9H5V8 836 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 ABI3Q9P2A4 366 aa12.29□□□□□ -0.44
DDX41-204ENST00000504807 C19orf25Q9UFG5 118 aaPredicted RBP12.29□□□□□ -0.44
DDX41-204ENST00000504807 ESYT3A0FGR9 886 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 LRIT2A6NDA9 550 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 SERPINA6P08185 405 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 SLC35E2BP0CK96 405 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 GGT5P36269 586 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 HSF1Q00613 529 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 POU4F1Q01851 419 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 GUCY2DQ02846 1103 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 RGS1Q08116 209 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 INAQ16352 499 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 EXT1Q16394 746 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 ADPRMQ3LIE5 342 aa12.28□□□□□ -0.44
DDX41-204ENST00000504807 KBTBD12Q3ZCT8 623 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms