RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 USP53Q70EK8 1073 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PPP1R3BQ86XI6 285 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 RASGRP3Q8IV61 690 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 FITM2Q8N6M3 262 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 LRRN4Q8WUT4 740 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 RNF125Q96EQ8 232 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF419Q96HQ0 510 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PRRC1Q96M27 445 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PKP2Q99959 881 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 MAGEB5Q9BZ81 275 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ST3GAL5Q9UNP4 418 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 DCCP43146 1447 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 TNS3Q68CZ2 1445 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CCDC195A0A1B0GUA6 201 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 A0A1W2PQ27 194 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 A0A1W2PQ64 194 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 A0A1W2PQD8 194 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF850A8MQ14 1090 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 EIF1BO60739 113 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ATE1O95260 518 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CALCRP30988 508 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 HOXA11P31270 313 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 EIF1P41567 113 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 TAS2R41P59536 307 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 HEPACAMQ14CZ8 416 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 MGAT5BQ3V5L5 792 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 COQ5Q5HYK3 327 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SNX29P2Q8IUI4 249 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 TRIM48Q8IWZ4 208 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 RBFAQ8N0V3 343 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 OR11L1Q8NGX0 322 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PHF10Q8WUB8 498 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 NPAS1Q99742 590 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 WDR18Q9BV38 432 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF160Q9HCG1 818 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 KCNH4Q9UQ05 1017 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 RFX7Q2KHR2 1363 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 KIAA0232Q92628 1395 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ZMYM6O95789 1325 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 NRXN3Q9Y4C0 1643 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 UBA6A0AVT1 1052 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SLCO1B7G3V0H7 640 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 K7EQM0 130 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 NR5A2O00482 541 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 B4GALT2O60909 372 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 FARS2O95363 451 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 TGFB1P01137 390 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ACSM4P0C7M7 580 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ARP10275 920 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ADARB1P78563 741 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PRPSAP1Q14558 356 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SLC1A5Q15758 541 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PDK4Q16654 411 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 MOGAT2Q3SYC2 334 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CERKLQ49MI3 558 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 MANEAQ5SRI9 462 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 DACT2Q5SW24 774 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CES3Q6UWW8 571 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 LIN37Q96GY3 246 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 OXNAD1Q96HP4 312 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 REEP6Q96HR9 211 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 LENG8Q96PV6 779 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF607Q96SK3 696 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PCDHAC1Q9H158 963 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SERHLQ9NQF3 203 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 YAE1D1Q9NRH1 226 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 TAS2R13Q9NYV9 303 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 UBP1Q9NZI7 540 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 WHRNQ9P202 907 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 KIF1BO60333 1816 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 A0A087WV62 115 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 A0A1B0GVM2 712 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 AQP12BA6NM10 295 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 F6UZH7 168 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ARPC3O15145 178 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CSDE1O75534 798 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 HCKP08631 526 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 OR52Z1P0C646 297 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SERPINA2P20848 420 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ITGA6P23229 1130 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CMPK1P30085 196 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 HNRNPA0Q13151 305 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CLN3Q13286 438 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 KCNAB1Q14722 419 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 COL28A1Q2UY09 1125 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 BCL7AQ4VC05 210 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 C2orf27AQ580R0 203 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 MON1AQ86VX9 555 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 VRK2Q86Y07 508 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SLC41A2Q96JW4 573 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 ACO2Q99798 780 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 C2orf40Q9H1Z8 148 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PRDM9Q9NQV7 894 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 UBQLN4Q9NRR5 601 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 AHSPQ9NZD4 102 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PCDHB10Q9UN67 800 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 LSM5Q9Y4Y9 91 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 TNKSO95271 1327 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CEP170BQ9Y4F5 1589 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 AATKQ6ZMQ8 1374 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms