RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CCDC25Q86WR0 208 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 CRLF3Q8IUI8 442 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 STAG3L4Q8TBR4 150 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 TSLPQ969D9 159 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 UBXN10Q96LJ8 280 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 GPR22Q99680 433 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 RBBP8Q99708 897 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 NPLQ9BXD5 320 aaPredicted RBP11.22□□□□□ -0.61
MED28-203ENST00000503945 PRM3Q9NNZ6 103 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 DNAJC11Q9NVH1 559 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 ANKRD10Q9NXR5 420 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 WWOXQ9NZC7 414 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 GRHL1Q9NZI5 618 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 HEATR5BQ9P2D3 2071 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 SEC14L3Q9UDX4 400 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 RNF112Q9ULX5 631 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 PCDHGB6Q9Y5F9 930 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 CSMD1Q96PZ7 3565 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 TAPBPO15533 448 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 ERI3O43414 337 aaKnown RBP11.21□□□□□ -0.61
MED28-203ENST00000503945 B3GALT2O43825 422 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 ZG16O60844 167 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 CLEC3AO75596 197 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 UNC5CO95185 931 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 CRABP2P29373 138 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 EEF1DP29692 281 aaKnown RBP11.21□□□□□ -0.61
MED28-203ENST00000503945 KCNK10P57789 538 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 GPX6P59796 221 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 TGM3Q08188 693 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 RCN2Q14257 317 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 SLBPQ14493 270 aaKnown RBP eCLIP11.21□□□□□ -0.61
MED28-203ENST00000503945 OR1C1Q15619 314 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 KBTBD12Q3ZCT8 623 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 KRTCAP3Q53RY4 240 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 XKR6Q5GH73 641 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 FJX1Q86VR8 437 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 KLHDC8AQ8IYD2 350 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 LGI4Q8N135 537 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 CA13Q8N1Q1 262 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 PPM1NQ8N819 430 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 SNX31Q8N9S9 440 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 ELP5Q8TE02 316 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 RELTQ969Z4 430 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 GAL3ST3Q96A11 431 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 KIAA1191Q96A73 305 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 ESAMQ96AP7 390 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 MS4A6EQ96DS6 147 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 PTCD3Q96EY7 689 aaKnown RBP11.21□□□□□ -0.61
MED28-203ENST00000503945 DEFB126Q9BYW3 111 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 REXO4Q9GZR2 422 aaKnown RBP11.21□□□□□ -0.61
MED28-203ENST00000503945 EHD1Q9H4M9 534 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 NMRAL1Q9HBL8 299 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 KLHL1Q9NR64 748 aa11.21□□□□□ -0.61
MED28-203ENST00000503945 PTBP2Q9UKA9 531 aaKnown RBP11.21□□□□□ -0.61
MED28-203ENST00000503945 ZNF490Q9ULM2 529 aaPredicted RBP11.21□□□□□ -0.61
MED28-203ENST00000503945 APCP25054 2843 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 TCRBV16S1A1N1A0A5B0 115 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 CTAGE15A4D2H0 777 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 GABRR3A8MPY1 467 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 A8MUA0 341 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 HNRNPRO43390 633 aaKnown RBP11.2□□□□□ -0.62
MED28-203ENST00000503945 CCNT2O60583 730 aaKnown RBP11.2□□□□□ -0.62
MED28-203ENST00000503945 WISP3O95389 354 aaPredicted RBP11.2□□□□□ -0.62
MED28-203ENST00000503945 SP1P08047 785 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 MAOAP21397 527 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 ELAVL4P26378 380 aaKnown RBP11.2□□□□□ -0.62
MED28-203ENST00000503945 MST1P26927 711 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 STX2P32856 288 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 KCNC1P48547 511 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 HSPA7P48741 367 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 CYB561P49447 251 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 PLA2G16P53816 162 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 CASP6P55212 293 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 HSD17B7P56937 341 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 IRF8Q02556 426 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 SLC13A2Q13183 592 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 RUNX2Q13950 521 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 OR4D1Q15615 310 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 TRADDQ15628 312 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 MAPKAPK3Q16644 382 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 PDK4Q16654 411 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 PAGE2BQ5JRK9 111 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 SLC25A25Q6KCM7 469 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 TRIM40Q6P9F5 258 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 TBC1D1Q86TI0 1168 aaPredicted RBP11.2□□□□□ -0.62
MED28-203ENST00000503945 ISCA2Q86U28 154 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 CTAGE6Q86UF2 777 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 TMEM178AQ8NBL3 297 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 FAM98AQ8NCA5 519 aaKnown RBP11.2□□□□□ -0.62
MED28-203ENST00000503945 SRFBP1Q8NEF9 429 aaKnown RBP11.2□□□□□ -0.62
MED28-203ENST00000503945 OR2L5Q8NG80 312 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 FBXO25Q8TCJ0 367 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 FBF1Q8TES7 1133 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 UBE2E3Q969T4 207 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 SIGLEC12Q96PQ1 595 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 CD244Q9BZW8 370 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 PHACTR1Q9C0D0 580 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 PRTFDC1Q9NRG1 225 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 PNO1Q9NRX1 252 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms