RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 Q9Y3F1 56 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 PRKYO43930 277 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 STBD1O95210 358 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 CPNE6O95741 557 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 ALPIP09923 528 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 AMD1P17707 334 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 ZNF792Q3KQV3 632 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 BCL7AQ4VC05 210 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 STEAP3Q658P3 488 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 RANBP3LQ86VV4 465 aaPredicted RBP16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 CADM2Q8N3J6 435 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 NELL2Q99435 816 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 ABCG5Q9H222 651 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 MMP28Q9H239 520 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 ZNF69Q9UC07 566 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 A0A1W2PQL4 384 aaPredicted RBP16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 SOCS7O14512 581 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 PI15O43692 258 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 CDK1P06493 297 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 FADDQ13158 208 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 ANKRD54Q6NXT1 300 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 GPR150Q8NGU9 434 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 SPACA7Q96KW9 195 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 DPCDQ9BVM2 203 aaPredicted RBP16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 GMPR2Q9P2T1 348 aaKnown RBP16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 FKBP7Q9Y680 259 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 ANKRD12Q6UB98 2062 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 SLC35G4P0C7Q5 338 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 GABRR2P28476 465 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 RPS5P46782 204 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 GINS1Q14691 196 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 CBX2Q14781 532 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 VARS2Q5ST30 1063 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 GALNT7Q86SF2 657 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 THOC6Q86W42 341 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 SLC5A8Q8N695 610 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 TOR1AIP2Q8NFQ8 470 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 C1orf216Q8TAB5 229 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 SCRN2Q96FV2 425 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 ACTR6Q9GZN1 396 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 DUS2Q9NX74 493 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 DEC1Q9P2X7 70 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 SARDHQ9UL12 918 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 A0A1B0GTW7 788 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 FAAHO00519 579 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 KDELR3O43731 214 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 KELP23276 732 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 UQCRC1P31930 480 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 NFE2L1Q14494 772 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 PCBP2Q15366 365 aaKnown RBP eCLIP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 SF3B4Q15427 424 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■■■■□ 22.3
HMGXB3-201ENST00000502717 FAAH2Q6GMR7 532 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 SMARCD3Q6STE5 483 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 GPR149Q86SP6 731 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 BEND7Q8N7W2 519 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 CPSF4LA6NMK7 179 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 GRM6O15303 877 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 ITGA10O75578 1167 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 ARHGEF15O94989 841 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 RGS6P49758 472 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 DUS1LQ6P1R4 473 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 PM20D2Q8IYS1 436 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 FAM109AQ8N4B1 249 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 CTRCQ99895 268 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 CCM2Q9BSQ5 444 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 BRD7Q9NPI1 651 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 MAU2Q9Y6X3 613 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 POP4O95707 220 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 C6orf47O95873 294 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 GGT2P36268 569 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 SP140Q13342 867 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 GTDC1Q4AE62 458 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 RNF130Q86XS8 419 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 WDR48Q8TAF3 677 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 EPYCQ99645 322 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 NDC1Q9BTX1 674 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 CREBZFQ9NS37 354 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 ZCCHC3Q9NUD5 404 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 CD84Q9UIB8 345 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 PPIEQ9UNP9 301 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 PLCL2Q9UPR0 1127 aa16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 MYO18AQ92614 2054 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-201ENST00000502717 LRRN3E7EW58 273 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 LYRM1O43325 122 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 ZNF806P0C7X5 589 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 RHCEP18577 417 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 CELP19835 753 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 EDNRBP24530 442 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 GBX2P52951 348 aaPredicted RBP16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 SLBPQ14493 270 aaKnown RBP eCLIP16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 MBOAT1Q6ZNC8 495 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 RTL4Q6ZR62 310 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 NPAS4Q8IUM7 802 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 ACOT12Q8WYK0 555 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 TBX5Q99593 518 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 SLC2A11Q9BYW1 496 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 LRRN3Q9H3W5 708 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 HCN3Q9P1Z3 774 aa16.58■□□□□ 0.25
HMGXB3-201ENST00000502717 STOX2Q9P2F5 926 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms