RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 CDH17Q12864 832 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 TBX2Q13207 712 aaPredicted RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 SNX1Q13596 522 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 KEAP1Q14145 624 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 TMED2Q15363 201 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 HKDC1Q2TB90 917 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 DNAJC21Q5F1R6 531 aaKnown RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 ICE2Q659A1 982 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 HIBCHQ6NVY1 386 aaPredicted RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 PODNL1Q6PEZ8 512 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 AFTPHQ6ULP2 937 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 CES3Q6UWW8 571 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 PACS1Q6VY07 963 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 NDUFAF7Q7L592 441 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 ADCK2Q7Z695 626 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 FGD2Q7Z6J4 655 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 ANKRD13BQ86YJ7 626 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 PLD3Q8IV08 490 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 TC2NQ8N9U0 490 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 PPFIBP2Q8ND30 876 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 OR2L3Q8NG85 312 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 GOT1L1Q8NHS2 421 aaPredicted RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 DENND1AQ8TEH3 1009 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 THAP3Q8WTV1 239 aaPredicted RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 ASZ1Q8WWH4 475 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 SREK1Q8WXA9 508 aaKnown RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 ATG4AQ8WYN0 398 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 PSMF1Q92530 271 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 HAS2Q92819 552 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 RAD51AP1Q96B01 352 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 MMABQ96EY8 250 aaPredicted RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 VPS50Q96JG6 964 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 C10orf90Q96M02 699 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 GPR137Q96N19 417 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 PPP1R2P1Q96PQ5 205 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 TTC1Q99614 292 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 DPH7Q9BTV6 452 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 CARD6Q9BX69 1037 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 TSSK1BQ9BXA7 367 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 TRIM5Q9C035 493 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 CHRNA10Q9GZZ6 450 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 SLC26A1Q9H2B4 701 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 TSPY26PQ9H489 355 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 WDR54Q9H977 334 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 SYNPO2LQ9H987 977 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 KCNJ16Q9NPI9 418 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 LUC7LQ9NQ29 371 aaKnown RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 KLHL1Q9NR64 748 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 CHRAC1Q9NRG0 131 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 CATSPERZQ9NTU4 200 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 ANKRD10Q9NXR5 420 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 STMN3Q9NZ72 180 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 MARCH4Q9P2E8 410 aaPredicted RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 TRPC4Q9UBN4 977 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 ZNF282Q9UDV7 671 aaPredicted RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 NXT1Q9UKK6 140 aaKnown RBP5.21□□□□□ -1.58
SPTA1-209ENST00000498708 EDARQ9UNE0 448 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 RNF6Q9Y252 685 aa5.21□□□□□ -1.58
SPTA1-209ENST00000498708 IGHV1-45A0A0A0MS14 117 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 GRID2IPA4D2P6 1211 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 OR2W5A6NFC9 320 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 TRIM64A6NGJ6 449 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 TRIM64BA6NI03 449 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 IDSB3KWA1 339 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 TARM1B6A8C7 271 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 GOLGA8KD6RF30 607 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 NPIPA5E9PKD4 350 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 F8W8V4 182 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 GOLGA8TH3BQL2 631 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 PRMT5O14744 637 aaPredicted RBP5.2□□□□□ -1.58
SPTA1-209ENST00000498708 CD3EAPO15446 510 aaKnown RBP5.2□□□□□ -1.58
SPTA1-209ENST00000498708 SRPX2O60687 465 aaPredicted RBP5.2□□□□□ -1.58
SPTA1-209ENST00000498708 NIPSNAP2O75323 286 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 NDUFS3O75489 264 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 USP1O94782 785 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 C1orf105O95561 183 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 SYF2O95926 243 aaKnown RBP5.2□□□□□ -1.58
SPTA1-209ENST00000498708 RPN2P04844 631 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 SERPINA7P05543 415 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 ANXA5P08758 320 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 ZSCAN5DPP0CG00 497 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 ABOP16442 354 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 ADRA1DP25100 572 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 AOAHP28039 575 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 CMPK1P30085 196 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 RPA3P35244 121 aaPredicted RBP5.2□□□□□ -1.58
SPTA1-209ENST00000498708 GYS2P54840 703 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 PLOD1Q02809 727 aaPredicted RBP5.2□□□□□ -1.58
SPTA1-209ENST00000498708 MUM1Q2TAK8 710 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 P3H1Q32P28 736 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 KRTAP24-1Q3LI83 254 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 YOD1Q5VVQ6 348 aaPredicted RBP5.2□□□□□ -1.58
SPTA1-209ENST00000498708 SHEQ5VZ18 495 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 ATG9BQ674R7 924 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 FBXO42Q6P3S6 717 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 LRRC8BQ6P9F7 803 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 UNC5DQ6UXZ4 953 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 RAD9BQ6WBX8 426 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 LANCL3Q6ZV70 420 aa5.2□□□□□ -1.58
SPTA1-209ENST00000498708 NEK10Q6ZWH5 1172 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms