RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 UBE3DQ7Z6J8 389 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 TMPRSS12Q86WS5 348 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 NUDT13Q86X67 352 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 GALNT15Q8N3T1 639 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 CAMKVQ8NCB2 501 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 OR2L5Q8NG80 312 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 WDR48Q8TAF3 677 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 IFI44Q8TCB0 444 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 SLC13A3Q8WWT9 602 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 GAL3ST3Q96A11 431 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 TESCQ96BS2 214 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 KLHL29Q96CT2 875 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 MS4A6EQ96DS6 147 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 SPDL1Q96EA4 605 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 MAP3K3Q99759 626 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 BTBD10Q9BSF8 475 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 REXO4Q9GZR2 422 aaKnown RBP13.5□□□□□ -0.25
VPS26A-209ENST00000497564 DDX31Q9H8H2 851 aaKnown RBP13.5□□□□□ -0.25
VPS26A-209ENST00000497564 EFCAB1Q9HAE3 211 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 PRM3Q9NNZ6 103 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 MYNNQ9NPC7 610 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 LHX9Q9NQ69 397 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 TAS2R1Q9NYW7 299 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 BAIAP2L1Q9UHR4 511 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 NDUFAF1Q9Y375 327 aa13.5□□□□□ -0.25
VPS26A-209ENST00000497564 SCN2AQ99250 2005 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 A0A0J9YVX5 310 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 A0A1W2PP18 115 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 SLC9B1P1A6NJY1 282 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 SAP18O00422 153 aaKnown RBP13.49□□□□□ -0.25
VPS26A-209ENST00000497564 NR5A2O00482 541 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 FBP2O00757 339 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 EEDO75530 441 aaKnown RBP13.49□□□□□ -0.25
VPS26A-209ENST00000497564 KLHL18O94889 574 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 SCELO95171 688 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 SERPIND1P05546 499 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 SMIM10L1P0DMW3 83 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 CAPN3P20807 821 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 TPP2P29144 1249 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-209ENST00000497564 DUSP3P51452 185 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-209ENST00000497564 TRA2BP62995 288 aaKnown RBP13.49□□□□□ -0.25
VPS26A-209ENST00000497564 CFHR1Q03591 330 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 ACTN3Q08043 901 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-209ENST00000497564 TGM3Q08188 693 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 ILKQ13418 452 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 DNAL1Q4LDG9 190 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 TOR1AIP1Q5JTV8 583 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 NKAIN2Q5VXU1 208 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 REP15Q6BDI9 236 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 OR4C11Q6IEV9 310 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 ABHD17CQ6PCB6 329 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 HACD2Q6Y1H2 254 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 MSANTD1Q6ZTZ1 278 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 IKBIPQ70UQ0 350 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 PRSS42Q7Z5A4 293 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 DNAJC22Q8N4W6 341 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 ZNF655Q8N720 491 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-209ENST00000497564 RBM15BQ8NDT2 890 aaKnown RBP13.49□□□□□ -0.25
VPS26A-209ENST00000497564 NCSTNQ92542 709 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 RERGQ96A58 199 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-209ENST00000497564 RCN3Q96D15 328 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 SMIM10Q96HG1 83 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 ZNF285Q96NJ3 590 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 TGM7Q96PF1 710 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 TSSK3Q96PN8 268 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 KCNC2Q96PR1 638 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 DPYSL5Q9BPU6 564 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 TBCDQ9BTW9 1192 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 EBPLQ9BY08 206 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 ENAMQ9NRM1 1142 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.49□□□□□ -0.25
VPS26A-209ENST00000497564 NDE1Q9NXR1 346 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 LOC400499M0QZD8 3231 aa13.49□□□□□ -0.25
VPS26A-209ENST00000497564 GNG14A0A1W2PPG7 69 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 CFAP73A6NFT4 308 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 URADA6NGE7 173 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 H0YGG7 62 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 TXNDC9O14530 226 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 ANGPT2O15123 496 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 TOX3O15405 576 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-209ENST00000497564 CFLARO15519 480 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 ZSCAN9O15535 394 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-209ENST00000497564 P2RX6O15547 441 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 SRPX2O60687 465 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-209ENST00000497564 PRAMEF10O60809 474 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 ZBTB11O95625 1053 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-209ENST00000497564 IL6P05231 212 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 KLK1P06870 262 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 CSF2RBP32927 897 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 RPL3P39023 403 aaKnown RBP13.48□□□□□ -0.25
VPS26A-209ENST00000497564 GABRA4P48169 554 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 ARF3P61204 181 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-209ENST00000497564 TLR1Q15399 786 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 FRMPD2BQ6IN97 320 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 TRIM40Q6P9F5 258 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 FAM92BQ6ZTR7 304 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 CAMKMTQ7Z624 323 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 KMT5CQ86Y97 462 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 ZCCHC7Q8N3Z6 543 aaKnown RBP13.48□□□□□ -0.25
VPS26A-209ENST00000497564 DPP10Q8N608 796 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms