RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 ZNF358Q9NW07 568 aa17.58■□□□□ 0.4
RPN1-208ENST00000497415 CSAG2Q9Y5P2 127 aa17.58■□□□□ 0.4
RPN1-208ENST00000497415 EXOC1LA0A1B0GW35 172 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 SEC24DO94855 1032 aaPredicted RBP17.57■□□□□ 0.4
RPN1-208ENST00000497415 ZIC2O95409 532 aaPredicted RBP17.57■□□□□ 0.4
RPN1-208ENST00000497415 SNRPAP09012 282 aaKnown RBP17.57■□□□□ 0.4
RPN1-208ENST00000497415 RUNX2Q13950 521 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 TSNAXIP1Q2TAA8 658 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 PRR30Q53SZ7 412 aaPredicted RBP17.57■□□□□ 0.4
RPN1-208ENST00000497415 SFT2D3Q587I9 215 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 GRHL2Q6ISB3 625 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 ABHD17CQ6PCB6 329 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 ADGRD1Q6QNK2 874 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 LINC00696Q6ZRV3 163 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 CUZD1Q86UP6 607 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 IQCKQ8N0W5 287 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 TEX9Q8N6V9 391 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 EFCAB3Q8N7B9 438 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 EIF1ADQ8N9N8 165 aaKnown RBP17.57■□□□□ 0.4
RPN1-208ENST00000497415 DNAJB14Q8TBM8 379 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 ZNF473Q8WTR7 871 aaKnown RBP17.57■□□□□ 0.4
RPN1-208ENST00000497415 ILKAPQ9H0C8 392 aaPredicted RBP17.57■□□□□ 0.4
RPN1-208ENST00000497415 PTGFRNQ9P2B2 879 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 PCDHGA10Q9Y5H3 936 aa17.57■□□□□ 0.4
RPN1-208ENST00000497415 TNPO3Q9Y5L0 923 aaKnown RBP17.57■□□□□ 0.4
RPN1-208ENST00000497415 A0A088AWK7 358 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 IGKV3D-11A0A0A0MRZ8 115 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 PRMT3O60678 531 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 B4GALT2O60909 372 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 ZNF10P21506 573 aaPredicted RBP17.56■□□□□ 0.4
RPN1-208ENST00000497415 PLA2G16P53816 162 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 BTG2P78543 158 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 EXT1Q16394 746 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 LGSNQ5TDP6 509 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 MED27Q6P2C8 311 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 TRIM40Q6P9F5 258 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 PAPD4Q6PIY7 484 aaKnown RBP17.56■□□□□ 0.4
RPN1-208ENST00000497415 TIFABQ6ZNK6 161 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 ATCAYQ86WG3 371 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 SIRT6Q8N6T7 355 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 GALNT11Q8NCW6 608 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 OR7G3Q8NG95 312 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 M1APQ8TC57 530 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 HAS2Q92819 552 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 PTCHD1Q96NR3 888 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 F2RL3Q96RI0 385 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 LPAR4Q99677 370 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 MS4A8Q9BY19 250 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 EPB41L4BQ9H329 900 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 PRDM7Q9NQW5 492 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 CPSF2Q9P2I0 782 aaKnown RBP17.56■□□□□ 0.4
RPN1-208ENST00000497415 TMCO1Q9UM00 188 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 TSC22D4Q9Y3Q8 395 aa17.56■□□□□ 0.4
RPN1-208ENST00000497415 A0A0G2JN53 185 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 LRRC14BA6NHZ5 514 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 FAM227AF5H4B4 570 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 PSMD12O00232 456 aaPredicted RBP17.55■□□□□ 0.4
RPN1-208ENST00000497415 SERPINB1P30740 379 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 MTTPP55157 894 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 RAB38P57729 211 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 OR4D2P58180 307 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 SLC29A2Q14542 456 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 BTBD16Q32M84 506 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 LIPJQ5W064 366 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 B3GNTL1Q67FW5 361 aaPredicted RBP17.55■□□□□ 0.4
RPN1-208ENST00000497415 H3F3CQ6NXT2 135 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 UBE3DQ7Z6J8 389 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 SNRNP40Q96DI7 357 aaKnown RBP17.55■□□□□ 0.4
RPN1-208ENST00000497415 SERINC2Q96SA4 455 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 PRDM9Q9NQV7 894 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 FETUBQ9UGM5 382 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 ADGRE2Q9UHX3 823 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 MMACHCQ9Y4U1 282 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 ANGPTL3Q9Y5C1 460 aa17.55■□□□□ 0.4
RPN1-208ENST00000497415 TCRBV16S1A1N1A0A5B0 115 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 STX16-NPEPL1H3BU86 382 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 E2F3O00716 465 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 STX16O14662 325 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 B3GALT2O43825 422 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 UGDHO60701 494 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 VPS4BO75351 444 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 SIX3O95343 332 aaPredicted RBP17.54■□□□□ 0.4
RPN1-208ENST00000497415 TSFMP43897 325 aaKnown RBP17.54■□□□□ 0.4
RPN1-208ENST00000497415 PIK3CGP48736 1102 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 ACTN3Q08043 901 aaPredicted RBP17.54■□□□□ 0.4
RPN1-208ENST00000497415 TGM3Q08188 693 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 GTF2H2Q13888 395 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 ZNF169Q14929 603 aaPredicted RBP17.54■□□□□ 0.4
RPN1-208ENST00000497415 TLR1Q15399 786 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 TMEM35AQ53FP2 167 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 GTF2H2CQ6P1K8 395 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 GOLGA7Q7Z5G4 137 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 CISD2Q8N5K1 135 aaKnown RBP17.54■□□□□ 0.4
RPN1-208ENST00000497415 PTGR2Q8N8N7 351 aaPredicted RBP17.54■□□□□ 0.4
RPN1-208ENST00000497415 SRFBP1Q8NEF9 429 aaKnown RBP17.54■□□□□ 0.4
RPN1-208ENST00000497415 ADAMTS18Q8TE60 1221 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 MTBPQ96DY7 904 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 C19orf60Q96EN9 201 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 KCNC2Q96PR1 638 aa17.54■□□□□ 0.4
RPN1-208ENST00000497415 BARD1Q99728 777 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms