RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 C5AR2Q9P296 337 aa15.47■□□□□ 0.07
SF3A1-209ENST00000496189 MRPS33Q9Y291 106 aaKnown RBP15.47■□□□□ 0.07
SF3A1-209ENST00000496189 CCDC88CQ9P219 2028 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 A8MT66 165 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 CHST10O43529 356 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 B3GALT2O43825 422 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 WFS1O76024 890 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 SIX3O95343 332 aaPredicted RBP15.46■□□□□ 0.07
SF3A1-209ENST00000496189 FHP07954 510 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 PLA2G16P53816 162 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 SOX8P57073 446 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 NAA20P61599 178 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 HERVK_113P63132 956 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 EEF1A2Q05639 463 aaKnown RBP15.46■□□□□ 0.07
SF3A1-209ENST00000496189 PCDH1Q08174 1060 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 PARP9Q8IXQ6 854 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 KBTBD2Q8IY47 623 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 C8orf44Q96CB5 159 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 CMTM7Q96FZ5 175 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 PGM2Q96G03 612 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 KCNC2Q96PR1 638 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 TUBB6Q9BUF5 446 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 NPLQ9BXD5 320 aaPredicted RBP15.46■□□□□ 0.07
SF3A1-209ENST00000496189 ERVK-6Q9BXR3 956 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 VN1R1Q9GZP7 353 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 ZNF160Q9HCG1 818 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 ASB1Q9Y576 335 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 SPACA6W5XKT8 324 aa15.46■□□□□ 0.07
SF3A1-209ENST00000496189 LRIT2A6NDA9 550 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 E2F3O00716 465 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 DLX3O60479 287 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 PLIN3O60664 434 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 CLDN9O95484 217 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 PROCP04070 461 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 SBK3P0C264 359 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 RAP1GDS1P52306 607 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 OLR1P78380 273 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 ACTN3Q08043 901 aaPredicted RBP15.45■□□□□ 0.06
SF3A1-209ENST00000496189 ASPHQ12797 758 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 HYAL2Q12891 473 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 DDX39BQ13838 428 aaKnown RBP15.45■□□□□ 0.06
SF3A1-209ENST00000496189 E2F2Q14209 437 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 CASP8Q14790 479 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 NSDHLQ15738 373 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 TMEM35AQ53FP2 167 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 AGAP7PQ5VUJ5 663 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 TTC19Q6DKK2 380 aaPredicted RBP15.45■□□□□ 0.06
SF3A1-209ENST00000496189 ZYG11AQ6WRX3 759 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 LAS2Q8IYD9 372 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 BANPQ8N9N5 519 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 OR5T3Q8NGG3 340 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 MS4A6EQ96DS6 147 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 THOC3Q96J01 351 aaKnown RBP15.45■□□□□ 0.06
SF3A1-209ENST00000496189 AGAP4Q96P64 663 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 NUDT9Q9BW91 350 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 C1QTNF3Q9BXJ4 246 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 RBCK1Q9BYM8 510 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 KLHL31Q9H511 634 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 EPS8L2Q9H6S3 715 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 MLXIPLQ9NP71 852 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 PCTPQ9UKL6 214 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 ZNF490Q9ULM2 529 aaPredicted RBP15.45■□□□□ 0.06
SF3A1-209ENST00000496189 STK38LQ9Y2H1 464 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 PLLPQ9Y342 182 aa15.45■□□□□ 0.06
SF3A1-209ENST00000496189 ATRXP46100 2492 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 IGHV1-45A0A0A0MS14 117 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 SYNDIG1LA6NDD5 238 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 LRRC14BA6NHZ5 514 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 CLDN4O14493 209 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 JRKO75564 520 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 CDC123O75794 336 aaPredicted RBP15.44■□□□□ 0.06
SF3A1-209ENST00000496189 SUPT7LO94864 414 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 OTCP00480 354 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 RPS17P08708 135 aaKnown RBP15.44■□□□□ 0.06
SF3A1-209ENST00000496189 SMIM10L1P0DMW3 83 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 CPA3P15088 417 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 EPORP19235 508 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 CD22P20273 847 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 NR1D1P20393 614 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 IMPDH1P20839 514 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 HNRNPH1P31943 449 aaKnown RBP15.44■□□□□ 0.06
SF3A1-209ENST00000496189 PIK3CBP42338 1070 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 PRKAA2P54646 552 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 MTTPP55157 894 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 ABRAXAS2Q15018 415 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 AP5B1Q2VPB7 878 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 ADPRMQ3LIE5 342 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 TMEM205Q6UW68 189 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 RIPOR1Q6ZS17 1223 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 CPEB2Q7Z5Q1 589 aaKnown RBP15.44■□□□□ 0.06
SF3A1-209ENST00000496189 ZADH2Q8N4Q0 377 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 OR7G3Q8NG95 312 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 SREK1Q8WXA9 508 aaKnown RBP15.44■□□□□ 0.06
SF3A1-209ENST00000496189 SMIM10Q96HG1 83 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 PKNOX2Q96KN3 472 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 SERINC2Q96SA4 455 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 SMAD5Q99717 465 aaKnown RBP15.44■□□□□ 0.06
SF3A1-209ENST00000496189 TBCDQ9BTW9 1192 aa15.44■□□□□ 0.06
SF3A1-209ENST00000496189 NOL11Q9H8H0 719 aaKnown RBP15.44■□□□□ 0.06
SF3A1-209ENST00000496189 EMCNQ9ULC0 261 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms