RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	ZCCHC23	Q6ZST2	131 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	GPRIN3	Q6ZVF9	776 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	OVCH1	Q7RTY7	1134 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	MYLK4	Q86YV6	388 aa	Predicted RBP	11.27	□□□□□ -0.61
APTX-233	ENST00000496030	IL22RA1	Q8N6P7	574 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	ZCCHC10	Q8TBK6	192 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	CNDP1	Q96KN2	507 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	FRG2B	Q96QU4	278 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	KCNA7	Q96RP8	456 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	MTERF1	Q99551	399 aa	Known RBP	11.27	□□□□□ -0.61
APTX-233	ENST00000496030	SLC7A5P2	Q9GIP4	190 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	SLC25A18	Q9H1K4	315 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	SLC26A1	Q9H2B4	701 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	ZNF304	Q9HCX3	659 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	DMRT3	Q9NQL9	472 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	PRDM7	Q9NQW5	492 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	FARSB	Q9NSD9	589 aa	Known RBP	11.27	□□□□□ -0.61
APTX-233	ENST00000496030	PSD3	Q9NYI0	1048 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	NDOR1	Q9UHB4	597 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	TRPS1	Q9UHF7	1281 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	PCDHGA6	Q9Y5G7	932 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	MAU2	Q9Y6X3	613 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	CELSR2	Q9HCU4	2923 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	VSTM2B	A6NLU5	285 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	ENO4	A6NNW6	628 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	C21orf140	B9A014	251 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030		H0YIG0	161 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	SGK494	L7N484	410 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	FOXE1	O00358	373 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	MANBA	O00462	879 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	NPHS1	O60500	1241 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	KLHL18	O94889	574 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	TGFB1	P01137	390 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	RAB40AL	P0C0E4	278 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	SFTPC	P11686	197 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	PCNA	P12004	261 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	AGXT	P21549	392 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	SERPINB1	P30740	379 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	DLST	P36957	453 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	RPS13	P62277	151 aa	Known RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	MAT1A	Q00266	395 aa	Known RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	DSG2	Q14126	1118 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	HERC3	Q15034	1050 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	NCF4	Q15080	339 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	NDUFA9	Q16795	377 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	SYT16	Q17RD7	645 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	DEFB134	Q4QY38	66 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	ARL13A	Q5H913	290 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	CFAP157	Q5JU67	520 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	DEPDC1	Q5TB30	811 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	KHDRBS2	Q5VWX1	349 aa	Known RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	ABHD17C	Q6PCB6	329 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	NUDCD3	Q8IVD9	361 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	FAM26E	Q8N5C1	309 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	CDYL2	Q8N8U2	506 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	OR2L5	Q8NG80	312 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	MTFMT	Q96DP5	389 aa	Known RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	MMAB	Q96EY8	250 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	TRMO	Q9BU70	441 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	GPR87	Q9BY21	358 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	OR51B5	Q9H339	312 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	MLXIPL	Q9NP71	852 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	MID1IP1	Q9NPA3	183 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	CTSF	Q9UBX1	484 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	ADGRE2	Q9UHX3	823 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	PPT2	Q9UMR5	302 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	CDC14A	Q9UNH5	594 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	FARSA	Q9Y285	508 aa	Known RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	NAALAD2	Q9Y3Q0	740 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	TIMM22	Q9Y584	194 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	MRPS18B	Q9Y676	258 aa	Known RBP	11.26	□□□□□ -0.61
APTX-233	ENST00000496030	SCN2A	Q99250	2005 aa		11.26	□□□□□ -0.61
APTX-233	ENST00000496030	C2CD3	Q4AC94	2353 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	WDR91	A4D1P6	747 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	ERI3	O43414	337 aa	Known RBP	11.25	□□□□□ -0.61
APTX-233	ENST00000496030	SH3BGRL	O75368	114 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	RDH16	O75452	317 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	PDYN	P01213	254 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	ALB	P02768	609 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	ENO1	P06733	434 aa	Known RBP	11.25	□□□□□ -0.61
APTX-233	ENST00000496030	CHRNG	P07510	517 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	PTX3	P26022	381 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-233	ENST00000496030	PTPN4	P29074	926 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	HTR6	P50406	440 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	EFNA3	P52797	238 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	STXBP1	P61764	594 aa	Known RBP	11.25	□□□□□ -0.61
APTX-233	ENST00000496030	RPS18	P62269	152 aa	Known RBP	11.25	□□□□□ -0.61
APTX-233	ENST00000496030	GALNT1	Q10472	559 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-233	ENST00000496030	ASPH	Q12797	758 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	DDX39B	Q13838	428 aa	Known RBP	11.25	□□□□□ -0.61
APTX-233	ENST00000496030	RUNX2	Q13950	521 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	NKG7	Q16617	165 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	UGT3A2	Q3SY77	523 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	TMEM35A	Q53FP2	167 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	SGO1	Q5FBB7	561 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	MLIP	Q5VWP3	458 aa		11.25	□□□□□ -0.61
APTX-233	ENST00000496030	ENDOV	Q8N8Q3	282 aa	Known RBP	11.25	□□□□□ -0.61
APTX-233	ENST00000496030	ANKRD42	Q8N9B4	389 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms