RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 KRT31Q15323 416 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 CAMK4Q16566 473 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 CLPPQ16740 277 aaPredicted RBP4.12□□□□□ -1.75
VPS52-222ENST00000495981 ZXDCQ2QGD7 858 aaPredicted RBP4.12□□□□□ -1.75
VPS52-222ENST00000495981 TCP11X2Q5H9J9 407 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 GARNL3Q5VVW2 1013 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 GPR139Q6DWJ6 353 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 DNAJC24Q6P3W2 148 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 VWA1Q6PCB0 445 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 WDR59Q6PJI9 974 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 CLEC17AQ6ZS10 378 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 RFLNAQ6ZTI6 216 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 Q6ZWC4 215 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 RD3Q7Z3Z2 195 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 GALNTL5Q7Z4T8 443 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 HSD11B1LQ7Z5J1 315 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 SLFN11Q7Z7L1 901 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 TSPAN33Q86UF1 283 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 SNX32Q86XE0 403 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 NAGSQ8N159 534 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 OR6C4Q8NGE1 309 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 OR4D9Q8NGE8 314 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 KIAA1524Q8TCG1 905 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 ART4Q93070 314 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 NUS1Q96E22 293 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 CELF6Q96J87 481 aaKnown RBP4.12□□□□□ -1.75
VPS52-222ENST00000495981 WWC2-AS2Q96NR7 200 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 PSKH2Q96QS6 385 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 ABHD1Q96SE0 405 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 CMKLR1Q99788 373 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 MGME1Q9BQP7 344 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 CNPY3Q9BT09 278 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 THAP7Q9BT49 309 aaPredicted RBP4.12□□□□□ -1.75
VPS52-222ENST00000495981 NPLQ9BXD5 320 aaPredicted RBP4.12□□□□□ -1.75
VPS52-222ENST00000495981 SPRY4Q9C004 299 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 HSD3B7Q9H2F3 369 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 ATP13A3Q9H7F0 1226 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 C20orf141Q9NUB4 165 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 TAS2R14Q9NYV8 317 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 TAAR2Q9P1P5 351 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 LRIT1Q9P2V4 623 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 MGAT4CQ9UBM8 478 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 UPB1Q9UBR1 384 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 HPCAL4Q9UM19 191 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 PKP3Q9Y446 797 aa4.12□□□□□ -1.75
VPS52-222ENST00000495981 NUP210LQ5VU65 1888 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 CROCCQ5TZA2 2017 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 A0A0U1RQS6 177 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 LOC101059948A0A1B0GTJ6 334 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 C17orf113A0A1B0GUU1 675 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 SIGLEC16A6NMB1 481 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 EIF3CLB5ME19 914 aaKnown RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 NPIPB6E9PJ23 425 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 PSMD11O00231 422 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 RNASET2O00584 256 aaKnown RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 PRYO14603 147 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 TMPRSS11DO60235 418 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 RAD1O60671 282 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 LRCH4O75427 683 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 SPDEFO95238 335 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 NADKO95544 446 aaPredicted RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 TSPAN15O95858 294 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 FGF1P05230 155 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 IVLP07476 585 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 ALDOCP09972 364 aaKnown RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 KRT3P12035 628 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 CTSEP14091 401 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 PKMP14618 531 aaKnown RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 TCF4P15884 667 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 ZNF37AP17032 561 aaPredicted RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 GABRB1P18505 474 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 PTMSP20962 102 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 KELP23276 732 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 F8A1P23610 371 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 MCM3P25205 808 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 NSFP46459 744 aaKnown RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 GNPDA1P46926 289 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 CLK3P49761 638 aaKnown RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 LIMK2P53671 638 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 TXNL4AP83876 142 aaKnown RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 RAD51Q06609 339 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 SLC10A7Q0GE19 358 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 AIMP2Q13155 320 aaKnown RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 TRA2AQ13595 282 aaKnown RBP eCLIP4.11□□□□□ -1.75
VPS52-222ENST00000495981 RFTN1Q14699 578 aaPredicted RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 SYCP1Q15431 976 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 INPP5JQ15735 1006 aaPredicted RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 NKAIN2Q5VXU1 208 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 PNCKQ6P2M8 343 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 PLBD1Q6P4A8 553 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 TMEM88Q6PEY1 159 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 SLC30A9Q6PML9 568 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 ZNF517Q6ZMY9 492 aaPredicted RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 RBM43Q6ZSC3 357 aaKnown RBP4.11□□□□□ -1.75
VPS52-222ENST00000495981 ASB18Q6ZVZ8 466 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 SLC46A3Q7Z3Q1 461 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 MDGA2Q7Z553 956 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 TAF8Q7Z7C8 310 aa4.11□□□□□ -1.75
VPS52-222ENST00000495981 TRIM74Q86UV6 250 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms