RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 C19orf25Q9UFG5 118 aaPredicted RBP11.67□□□□□ -0.54
MRPL55-233ENST00000495899 DCDC2Q9UHG0 476 aa11.67□□□□□ -0.54
MRPL55-233ENST00000495899 PCDHGA11Q9Y5H2 935 aa11.67□□□□□ -0.54
MRPL55-233ENST00000495899 FER1L5A0AVI2 2057 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 IGHV1-45A0A0A0MS14 117 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 ZNF860A6NHJ4 632 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 MAGEB17A8MXT2 336 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 H0YIV9 168 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 ERI3O43414 337 aaKnown RBP11.66□□□□□ -0.54
MRPL55-233ENST00000495899 DPM1O60762 260 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 JRKO75564 520 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 TBX6O95947 436 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-233ENST00000495899 PDGFAP04085 211 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 FHP07954 510 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 SBK3P0C264 359 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 COX6A1P12074 109 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 RNH1P13489 461 aaKnown RBP11.66□□□□□ -0.54
MRPL55-233ENST00000495899 TAC1P20366 129 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 HNRNPH1P31943 449 aaKnown RBP11.66□□□□□ -0.54
MRPL55-233ENST00000495899 CASRP41180 1078 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 PIK3CBP42338 1070 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 ARFIP1P53367 373 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 VSNL1P62760 191 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 MFSD4BQ5TF39 518 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 TRIM40Q6P9F5 258 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 ABHD17CQ6PCB6 329 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 EMBQ6PCB8 327 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 IGFL3Q6UXB1 125 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 RIPOR1Q6ZS17 1223 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 GOLGA7Q7Z5G4 137 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 PTRH1Q86Y79 214 aaKnown RBP11.66□□□□□ -0.54
MRPL55-233ENST00000495899 KBTBD2Q8IY47 623 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 PTGR2Q8N8N7 351 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-233ENST00000495899 L3MBTL4Q8NA19 623 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 OR7G3Q8NG95 312 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 OR5T3Q8NGG3 340 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 ZNF473Q8WTR7 871 aaKnown RBP11.66□□□□□ -0.54
MRPL55-233ENST00000495899 MZB1Q8WU39 189 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 TM9SF4Q92544 642 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 C8orf44Q96CB5 159 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 PHF21BQ96EK2 531 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 CMTM7Q96FZ5 175 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 PEX11GQ96HA9 241 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 TUBB6Q9BUF5 446 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 C1QTNF3Q9BXJ4 246 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 AICDAQ9GZX7 198 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 ZNF552Q9H707 407 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-233ENST00000495899 ZNF160Q9HCG1 818 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 LANCL2Q9NS86 450 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 RIC8BQ9NVN3 520 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 PSD3Q9NYI0 1048 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 TBK1Q9UHD2 729 aa11.66□□□□□ -0.54
MRPL55-233ENST00000495899 TLN1Q9Y490 2541 aaKnown RBP11.66□□□□□ -0.54
MRPL55-233ENST00000495899 LRRC14BA6NHZ5 514 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 PSMD12O00232 456 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-233ENST00000495899 B3GALT2O43825 422 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 SLC28A2O43868 658 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 DNAJB6O75190 326 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 CDH16O75309 829 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 SIX3O95343 332 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-233ENST00000495899 CLDN9O95484 217 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 SHBGP04278 402 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 SERPINA7P05543 415 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 TUBBP07437 444 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 NR1D1P20393 614 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 ITGA3P26006 1051 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 EEF1DP29692 281 aaKnown RBP11.65□□□□□ -0.54
MRPL55-233ENST00000495899 HSD17B3P37058 310 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 TSFMP43897 325 aaKnown RBP11.65□□□□□ -0.54
MRPL55-233ENST00000495899 RHAGQ02094 409 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 NSDHLQ15738 373 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 C10orf62Q5T681 223 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-233ENST00000495899 AGAP7PQ5VUJ5 663 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 FAAH2Q6GMR7 532 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 JMJD6Q6NYC1 403 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-233ENST00000495899 CPEB2Q7Z5Q1 589 aaKnown RBP11.65□□□□□ -0.54
MRPL55-233ENST00000495899 ADAMTS18Q8TE60 1221 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 ATP6V1E2Q96A05 226 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 IMMP1LQ96LU5 166 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 MAGEB10Q96LZ2 347 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-233ENST00000495899 AGAP4Q96P64 663 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 QRFPRQ96P65 431 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 KCNC2Q96PR1 638 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 SERINC2Q96SA4 455 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 TBCDQ9BTW9 1192 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 NTMT1Q9BV86 223 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 MS4A8Q9BY19 250 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 NOL11Q9H8H0 719 aaKnown RBP11.65□□□□□ -0.54
MRPL55-233ENST00000495899 TMEM216Q9P0N5 145 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 PCTPQ9UKL6 214 aa11.65□□□□□ -0.54
MRPL55-233ENST00000495899 PCSK5Q92824 1860 aa11.64□□□□□ -0.55
MRPL55-233ENST00000495899 C4orf51C9J302 202 aa11.64□□□□□ -0.55
MRPL55-233ENST00000495899 MASP2O00187 686 aa11.64□□□□□ -0.55
MRPL55-233ENST00000495899 FOXE1O00358 373 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-233ENST00000495899 OR7A17O14581 309 aa11.64□□□□□ -0.55
MRPL55-233ENST00000495899 PRMT3O60678 531 aa11.64□□□□□ -0.55
MRPL55-233ENST00000495899 B3GALT4O96024 378 aa11.64□□□□□ -0.55
MRPL55-233ENST00000495899 NUDT17P0C025 328 aa11.64□□□□□ -0.55
MRPL55-233ENST00000495899 PCNAP12004 261 aa11.64□□□□□ -0.55
MRPL55-233ENST00000495899 PLA2G2AP14555 144 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms