RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 CDC14AQ9UNH5 594 aa9.03□□□□□ -0.96
ACTN4-207ENST00000495553 PCDHGA3Q9Y5H0 932 aa9.03□□□□□ -0.96
ACTN4-207ENST00000495553 SLC22A7Q9Y694 548 aa9.03□□□□□ -0.96
ACTN4-207ENST00000495553 IGF2RP11717 2491 aa9.03□□□□□ -0.96
ACTN4-207ENST00000495553 CELSR3Q9NYQ7 3312 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 HEATR5BQ9P2D3 2071 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 HYKKA2RU49 373 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 C9orf172C9J069 976 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 SAP18O00422 153 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 ZNF195O14628 629 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 B3GALT2O43825 422 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 PCDH7O60245 1069 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 PRAMEF10O60809 474 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 SH3BGRLO75368 114 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 JUNP05412 331 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 PIM1P11309 404 aaPredicted RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 FOLR1P15328 257 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 TLX1P31314 330 aaPredicted RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 RPL3P39023 403 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 MAPK12P53778 367 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 PLA2G16P53816 162 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 RPL38P63173 70 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 SF3A3Q12874 501 aaKnown RBP eCLIP9.02□□□□□ -0.978e-8■■□□□ 12.7
ACTN4-207ENST00000495553 KCNAB1Q14722 419 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 SLC9A5Q14940 896 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 GPR19Q15760 415 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 DEFB110Q30KQ9 67 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 C6orf136Q5SQH8 315 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 FRMPD2BQ6IN97 320 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 CGB2Q6NT52 195 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 NOXRED1Q6NXP6 359 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 ATG14Q6ZNE5 492 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 LRRC69Q6ZNQ3 347 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 Q6ZSR9 355 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 LARP4Q71RC2 724 aaKnown RBP eCLIP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 COMMD6Q7Z4G1 85 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 PROSER1Q86XN7 944 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 TMEM126BQ8IUX1 230 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 MIER2Q8N344 545 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 METTL4Q8N3J2 472 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 C1orf52Q8N6N3 182 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 BMPERQ8N8U9 685 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 ZNF248Q8NDW4 579 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 C10orf82Q8WW14 230 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 MS4A6EQ96DS6 147 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 MVB12AQ96EY5 273 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 NAF1Q96HR8 494 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 C3orf30Q96M34 536 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 FCRL4Q96PJ5 515 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 SERINC2Q96SA4 455 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 PRPF18Q99633 342 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 C17orf62Q9BQA9 187 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 EBF4Q9BQW3 602 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 FAIM2Q9BWQ8 316 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 MRPL1Q9BYD6 325 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 WDR41Q9HAD4 459 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 CLK4Q9HAZ1 481 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 KCNK13Q9HB14 408 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 LYARQ9NX58 379 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 SIDT1Q9NXL6 827 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 ASIC5Q9NY37 505 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 MCM8Q9UJA3 840 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 RAXQ9Y2V3 346 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 WBP11Q9Y2W2 641 aaKnown RBP9.02□□□□□ -0.97
ACTN4-207ENST00000495553 PTGDR2Q9Y5Y4 395 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 B3GALT1Q9Y5Z6 326 aa9.02□□□□□ -0.97
ACTN4-207ENST00000495553 LOC105369274A0A096LPK9 316 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 LOC102723532A0A0G2JNH3 316 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 FITM1A5D6W6 292 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 STMND1H3BQB6 276 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 PLPP1O14494 284 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 SLC22A2O15244 555 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 TLX3O43711 291 aaPredicted RBP9.01□□□□□ -0.97
ACTN4-207ENST00000495553 NRP2O60462 931 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 CAPNS1P04632 268 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 KLK1P06870 262 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 ANXA4P09525 319 aaPredicted RBP9.01□□□□□ -0.97
ACTN4-207ENST00000495553 ZNF888P0CJ79 500 aaPredicted RBP9.01□□□□□ -0.97
ACTN4-207ENST00000495553 ALOX12P18054 663 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 HIST1H1TP22492 207 aaPredicted RBP9.01□□□□□ -0.97
ACTN4-207ENST00000495553 CD82P27701 267 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 ADSLP30566 484 aaPredicted RBP9.01□□□□□ -0.97
ACTN4-207ENST00000495553 TIA1P31483 386 aaKnown RBP eCLIP9.01□□□□□ -0.97
ACTN4-207ENST00000495553 HNRNPH1P31943 449 aaKnown RBP9.01□□□□□ -0.97
ACTN4-207ENST00000495553 HPCAL1P37235 193 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 ATP4BP51164 291 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 CLNS1AP54105 237 aaKnown RBP9.01□□□□□ -0.97
ACTN4-207ENST00000495553 MTTPP55157 894 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 TRA2BP62995 288 aaKnown RBP9.01□□□□□ -0.97
ACTN4-207ENST00000495553 BTN3A2P78410 334 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 ZNF763Q0D2J5 394 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 TBL3Q12788 808 aaKnown RBP9.01□□□□□ -0.97
ACTN4-207ENST00000495553 FAM53BQ14153 422 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 SQLEQ14534 574 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 MAPRE2Q15555 327 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 ST3GAL2Q16842 350 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 PRTGQ2VWP7 1150 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 ADPRMQ3LIE5 342 aa9.01□□□□□ -0.97
ACTN4-207ENST00000495553 IL23RQ5VWK5 629 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms