RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TBX19O60806 448 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 PIAS2O75928 621 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 SCELO95171 688 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 LRATO95237 230 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 CEACAM1P13688 526 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 ZNF10P21506 573 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-214ENST00000495485 AK4P27144 223 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-214ENST00000495485 GRIA3P42263 894 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 HSPA13P48723 471 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 MAPK12P53778 367 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 CSNK1G2P78368 415 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 MEF2AQ02078 507 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-214ENST00000495485 RGS1Q08116 209 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 C2orf80Q0P641 193 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 ABHD18Q0P651 414 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 BIRC2Q13490 618 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 TAF11Q15544 211 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 HKDC1Q2TB90 917 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 CMPK2Q5EBM0 449 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 GLYATQ6IB77 296 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 OR4F3Q6IEY1 312 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 TCEAL6Q6IPX3 200 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 OOSP2Q86WS3 158 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 FAM181AQ8N9Y4 354 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 LINC01555Q8NAE3 123 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 ADCY4Q8NFM4 1077 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 OR2T12Q8NG77 320 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 OR2L3Q8NG85 312 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 SAP25Q8TEE9 199 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 C16orf78Q8WTQ4 265 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 TCEAL3Q969E4 200 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 PPWD1Q96BP3 646 aaKnown RBP9.8□□□□□ -0.84
HDAC3-214ENST00000495485 CCDC115Q96NT0 180 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 SLC39A3Q9BRY0 314 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 TACO1Q9BSH4 297 aaKnown RBP9.8□□□□□ -0.84
HDAC3-214ENST00000495485 DPH7Q9BTV6 452 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 FAIM2Q9BWQ8 316 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 MS4A8Q9BY19 250 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 UGT2B28Q9BY64 529 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-214ENST00000495485 PCDHAC1Q9H158 963 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 OR51B5Q9H339 312 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 Q9H521 79 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 XKR8Q9H6D3 395 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 C8orf4Q9NR00 106 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 ARMC1Q9NVT9 282 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 DLL3Q9NYJ7 618 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 SH3BP4Q9P0V3 963 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 TAAR2Q9P1P5 351 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 APOBEC3BQ9UH17 382 aaKnown RBP9.8□□□□□ -0.84
HDAC3-214ENST00000495485 PACSIN3Q9UKS6 424 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 VPS4AQ9UN37 437 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 CA5BQ9Y2D0 317 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 LRRC42Q9Y546 428 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 AP1M2Q9Y6Q5 423 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 CROCCQ5TZA2 2017 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 DHRS12A0PJE2 317 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 GABRR3A8MPY1 467 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 FAM220BPB1ANY3 271 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 ARPC2O15144 300 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 NDUFS4O43181 175 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 AQP9O43315 295 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 PRICKLE3O43900 615 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 SORBS2O94875 1100 aaKnown RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 KLK1P06870 262 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 ANXA6P08133 673 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 DRD2P14416 443 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 TACR1P25103 407 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 MSX2P35548 267 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 SLC19A1P41440 591 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 DUSP3P51452 185 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 RAE1P78406 368 aaKnown RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 RELAQ04206 551 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 EIF2B5Q13144 721 aaKnown RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 ILKQ13418 452 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 TRIP10Q15642 601 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 UGT8Q16880 541 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 FAM98BQ52LJ0 330 aaKnown RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 PRRT3Q5FWE3 981 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 RABL3Q5HYI8 236 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 FAM219BQ5XKK7 198 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 OR4C11Q6IEV9 310 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 TRIM40Q6P9F5 258 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 ZNF621Q6ZSS3 439 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 GLRX5Q86SX6 157 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 PIP4P1Q86T03 277 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 MICU2Q8IYU8 434 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 MFSD9Q8NBP5 474 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 FAM156AQ8NDB6 213 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 ICA1LQ8NDH6 482 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 ZNF548Q8NEK5 533 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 OR7A2PQ8NGA2 310 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 OR52E4Q8NGH9 312 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 OR4C6Q8NH72 309 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 GFM2Q969S9 779 aaKnown RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 EGLN2Q96KS0 407 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 KCNC2Q96PR1 638 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 ZNF184Q99676 751 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 TBCDQ9BTW9 1192 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 NLNQ9BYT8 704 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms