RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	M1AP	Q8TC57	530 aa		12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	ADAMTS18	Q8TE60	1221 aa		12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	CCT6B	Q92526	530 aa		12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	UBE2E3	Q969T4	207 aa		12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	FAR2	Q96K12	515 aa		12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	GPR78	Q96P69	363 aa		12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	LPAR4	Q99677	370 aa		12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	BARD1	Q99728	777 aa	Known RBP	12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	REXO4	Q9GZR2	422 aa	Known RBP	12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	ZNF490	Q9ULM2	529 aa	Predicted RBP	12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	IKBKG	Q9Y6K9	419 aa		12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	DOPEY2	Q9Y3R5	2298 aa		12.54	□□□□□ -0.4
RBM28-208	ENST00000495327	IGKV3D-11	A0A0A0MRZ8	115 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	TCRBV16S1A1N1	A0A5B0	115 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	DYTN	A2CJ06	578 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	PSMD12	O00232	456 aa	Predicted RBP	12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	KRT38	O76015	456 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	UQCRH	P07919	91 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	EPB42	P16452	691 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	SERPINB1	P30740	379 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	UQCRFS1	P47985	274 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	GLRB	P48167	497 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	ALDH18A1	P54886	795 aa	Known RBP	12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	INA	Q16352	499 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	HIST2H2AC	Q16777	129 aa	Predicted RBP	12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	BTBD16	Q32M84	506 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	SFT2D3	Q587I9	215 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	HIST2H2AA3	Q6FI13	130 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	ADNP2	Q6IQ32	1131 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	GRHL2	Q6ISB3	625 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	H3F3C	Q6NXT2	135 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	RPUSD3	Q6P087	351 aa	Known RBP	12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	METTL2B	Q6P1Q9	378 aa	Known RBP	12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	TRIM40	Q6P9F5	258 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	IFT20	Q8IY31	132 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	LAS2	Q8IYD9	372 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	DCAKD	Q8WVC6	231 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	HAS2	Q92819	552 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	CNDP1	Q96KN2	507 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	QRFPR	Q96P65	431 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	MS4A8	Q9BY19	250 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	MMP25	Q9NPA2	562 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	PRDM9	Q9NQV7	894 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	TEKT2	Q9UIF3	430 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	NFU1	Q9UMS0	254 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	NTNG1	Q9Y2I2	539 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	MMACHC	Q9Y4U1	282 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	HIVEP3	Q5T1R4	2406 aa		12.53	□□□□□ -0.4
RBM28-208	ENST00000495327	UTP20	O75691	2785 aa	Known RBP	12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	SYNDIG1L	A6NDD5	238 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	TCP11X1	B4DZS4	312 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	B3GALT2	O43825	422 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	PRMT3	O60678	531 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	COL6A2	P12110	1019 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	GFAP	P14136	432 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	GNLY	P22749	145 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	MSH2	P43246	934 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	TNFSF10	P50591	281 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	RAB38	P57729	211 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	OR4D2	P58180	307 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	SLC26A5	P58743	744 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	BTN3A2	P78410	334 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	ARG2	P78540	354 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	TGM3	Q08188	693 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	PCBP2	Q15366	365 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	TSNAXIP1	Q2TAA8	658 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	ABHD17B	Q5VST6	288 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	MED27	Q6P2C8	311 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	ABHD17C	Q6PCB6	329 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	FAM26E	Q8N5C1	309 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	CISD2	Q8N5K1	135 aa	Known RBP	12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	ZNF473	Q8WTR7	871 aa	Known RBP	12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	C19orf60	Q96EN9	201 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	PTCHD1	Q96NR3	888 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	KCNC2	Q96PR1	638 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	SERINC2	Q96SA4	455 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	VPS11	Q9H270	941 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	ASF1B	Q9NVP2	202 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	MAP10	Q9P2G4	905 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	TSC22D4	Q9Y3Q8	395 aa		12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	COPG1	Q9Y678	874 aa	Known RBP	12.52	□□□□□ -0.41
RBM28-208	ENST00000495327	TRAV17	A0A0B4J275	112 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327		A0A0G2JN53	185 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	EXOC1L	A0A1B0GW35	172 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	OR5H15	A6NDH6	313 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	SAGE2P	A6NJ88	616 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	POC1B-GALNT4	F8VUJ3	575 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	UGDH	O60701	494 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	B4GALT2	O60909	372 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	RBP1	P09455	135 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	PIK3CG	P48736	1102 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	PLA2G16	P53816	162 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	MTTP	P55157	894 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	ZNF33B	Q06732	778 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	ACTN3	Q08043	901 aa	Predicted RBP	12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	UBAP2L	Q14157	1087 aa	Known RBP	12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	TERF2	Q15554	542 aa		12.51	□□□□□ -0.41
RBM28-208	ENST00000495327	PFKFB4	Q16877	469 aa		12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms