RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 NSUN5Q96P11 429 aaKnown RBP13.53□□□□□ -0.24
SCAP-213ENST00000494938 NPLQ9BXD5 320 aaPredicted RBP13.53□□□□□ -0.24
SCAP-213ENST00000494938 MS4A8Q9BY19 250 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 EPN3Q9H201 632 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 NOL11Q9H8H0 719 aaKnown RBP13.53□□□□□ -0.24
SCAP-213ENST00000494938 ZBTB26Q9HCK0 441 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 PCTPQ9UKL6 214 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 RNF11Q9Y3C5 154 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 TSC22D4Q9Y3Q8 395 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 MDC1Q14676 2089 aaKnown RBP13.52□□□□□ -0.24
SCAP-213ENST00000494938 MAGEB17A8MXT2 336 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 H0YIV9 168 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 PPP6CO00743 305 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 DLX3O60479 287 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 UGDHO60701 494 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 TGFB1P01137 390 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 SERPINA7P05543 415 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 PCNAP12004 261 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 RNH1P13489 461 aaKnown RBP13.52□□□□□ -0.25
SCAP-213ENST00000494938 SLCO1A2P46721 670 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 CD97P48960 835 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 RASA2Q15283 850 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 NSDHLQ15738 373 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 DEPDC1Q5TB30 811 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 WDR93Q6P2C0 686 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 RPS27LQ71UM5 84 aaKnown RBP13.52□□□□□ -0.25
SCAP-213ENST00000494938 LCA5Q86VQ0 697 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 HPS6Q86YV9 775 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 KBTBD2Q8IY47 623 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 OR52B6Q8NGF0 335 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 HUS1BQ8NHY5 278 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 AENQ8WTP8 325 aaKnown RBP13.52□□□□□ -0.25
SCAP-213ENST00000494938 TSLPQ969D9 159 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 FAR2Q96K12 515 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 C1QTNF3Q9BXJ4 246 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 MFRPQ9BY79 579 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 ACTR8Q9H981 624 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 KCMF1Q9P0J7 381 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.52□□□□□ -0.25
SCAP-213ENST00000494938 G3BP2Q9UN86 482 aaKnown RBP13.52□□□□□ -0.25
SCAP-213ENST00000494938 V9GYY5 206 aaPredicted RBP13.52□□□□□ -0.25
SCAP-213ENST00000494938 TENM4Q6N022 2769 aa13.52□□□□□ -0.25
SCAP-213ENST00000494938 CCDC88CQ9P219 2028 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 A0A1B0GTL3 188 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 A8MT66 165 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 PYCARD-AS1I3L0S3 204 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 CYR61O00622 381 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 KLHL41O60662 606 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 PRMT3O60678 531 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 DPM1O60762 260 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 SH3BGRLO75368 114 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 GSTA1P08263 222 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 RPS17P08708 135 aaKnown RBP13.51□□□□□ -0.25
SCAP-213ENST00000494938 SERPINB1P30740 379 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 PIK3CBP42338 1070 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 PIK3CGP48736 1102 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 NEK2P51955 445 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 ABRAXAS2Q15018 415 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 CPSF6Q16630 551 aaKnown RBP eCLIP13.51□□□□□ -0.25
SCAP-213ENST00000494938 PLEKHN1Q494U1 663 aaPredicted RBP13.51□□□□□ -0.25
SCAP-213ENST00000494938 TMEM35AQ53FP2 167 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 AGAP7PQ5VUJ5 663 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 JMJD6Q6NYC1 403 aaPredicted RBP13.51□□□□□ -0.25
SCAP-213ENST00000494938 ZNF793Q6ZN11 406 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 CNPY4Q8N129 248 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 Q8NA96 180 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 TMEM52Q8NDY8 209 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 OR2W6PQ8NHA6 318 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 WDR20Q8TBZ3 569 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 EPS8L3Q8TE67 593 aaKnown RBP13.51□□□□□ -0.25
SCAP-213ENST00000494938 ZNF483Q8TF39 744 aaPredicted RBP13.51□□□□□ -0.25
SCAP-213ENST00000494938 CMTM7Q96FZ5 175 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 PTCHD1Q96NR3 888 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 AGAP4Q96P64 663 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 CDK15Q96Q40 435 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 LMF1Q96S06 567 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 SERINC2Q96SA4 455 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 TUBB6Q9BUF5 446 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 NTMT1Q9BV86 223 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 OR51B5Q9H339 312 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 PPCSQ9HAB8 311 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 NECTIN3Q9NQS3 549 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 RIC8BQ9NVN3 520 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 DCDC2Q9UHG0 476 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 ADGRE2Q9UHX3 823 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 EMCNQ9ULC0 261 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 PCDHGA11Q9Y5H2 935 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 CLDN16Q9Y5I7 305 aa13.51□□□□□ -0.25
SCAP-213ENST00000494938 PRRC2CQ9Y520 2896 aaKnown RBP13.51□□□□□ -0.25
SCAP-213ENST00000494938 IGKV3D-11A0A0A0MRZ8 115 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 J3QKU1 62 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 SAP18O00422 153 aaKnown RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 RTCAO00442 366 aaKnown RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 B3GALT2O43825 422 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 SEC24DO94855 1032 aaPredicted RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 CLDN9O95484 217 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 ALPPP05187 535 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 ITGAMP11215 1152 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 ICAM2P13598 275 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 MAOAP21397 527 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms