RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ZNF473Q8WTR7 871 aaKnown RBP15.03■□□□□ -0
LIME1-209ENST00000494776 CAVIN3Q969G5 261 aa15.03■□□□□ -0
LIME1-209ENST00000494776 CMTM7Q96FZ5 175 aa15.03■□□□□ -0
LIME1-209ENST00000494776 THOC3Q96J01 351 aaKnown RBP15.03■□□□□ -0
LIME1-209ENST00000494776 NSUN5Q96P11 429 aaKnown RBP15.03■□□□□ -0
LIME1-209ENST00000494776 KCNC2Q96PR1 638 aa15.03■□□□□ -0
LIME1-209ENST00000494776 CDK15Q96Q40 435 aa15.03■□□□□ -0
LIME1-209ENST00000494776 SERINC2Q96SA4 455 aa15.03■□□□□ -0
LIME1-209ENST00000494776 CENPKQ9BS16 269 aa15.03■□□□□ -0
LIME1-209ENST00000494776 NPLQ9BXD5 320 aaPredicted RBP15.03■□□□□ -0
LIME1-209ENST00000494776 MS4A8Q9BY19 250 aa15.03■□□□□ -0
LIME1-209ENST00000494776 ROGDIQ9GZN7 287 aa15.03■□□□□ -0
LIME1-209ENST00000494776 AICDAQ9GZX7 198 aa15.03■□□□□ -0
LIME1-209ENST00000494776 RIC8BQ9NVN3 520 aa15.03■□□□□ -0
LIME1-209ENST00000494776 RNF11Q9Y3C5 154 aa15.03■□□□□ -0
LIME1-209ENST00000494776 PCDHGB7Q9Y5F8 929 aa15.03■□□□□ -0
LIME1-209ENST00000494776 PCSK5Q92824 1860 aa15.03■□□□□ -0
LIME1-209ENST00000494776 KALRNO60229 2985 aa15.03■□□□□ -0
LIME1-209ENST00000494776 IGHV1-45A0A0A0MS14 117 aa15.02■□□□□ -0
LIME1-209ENST00000494776 H0YIV9 168 aa15.02■□□□□ -0
LIME1-209ENST00000494776 OR7A17O14581 309 aa15.02■□□□□ -0
LIME1-209ENST00000494776 PDGFAP04085 211 aa15.02■□□□□ -0
LIME1-209ENST00000494776 UQCRHP07919 91 aa15.02■□□□□ -0
LIME1-209ENST00000494776 NUDT17P0C025 328 aa15.02■□□□□ -0
LIME1-209ENST00000494776 SBK3P0C264 359 aa15.02■□□□□ -0
LIME1-209ENST00000494776 ATP5F1P24539 256 aaPredicted RBP15.02■□□□□ -0
LIME1-209ENST00000494776 PIK3CBP42338 1070 aa15.02■□□□□ -0
LIME1-209ENST00000494776 RAP1GDS1P52306 607 aa15.02■□□□□ -0
LIME1-209ENST00000494776 MTTPP55157 894 aa15.02■□□□□ -0
LIME1-209ENST00000494776 HERVK_113P63132 956 aa15.02■□□□□ -0
LIME1-209ENST00000494776 KLRB1Q12918 225 aa15.02■□□□□ -0
LIME1-209ENST00000494776 ABRAXAS2Q15018 415 aa15.02■□□□□ -0
LIME1-209ENST00000494776 ZRSR2Q15696 482 aaKnown RBP15.02■□□□□ -0
LIME1-209ENST00000494776 AP5B1Q2VPB7 878 aa15.02■□□□□ -0
LIME1-209ENST00000494776 TMEM35AQ53FP2 167 aa15.02■□□□□ -0
LIME1-209ENST00000494776 ABHD17CQ6PCB6 329 aa15.02■□□□□ -0
LIME1-209ENST00000494776 TMEM205Q6UW68 189 aa15.02■□□□□ -0
LIME1-209ENST00000494776 LANCL3Q6ZV70 420 aa15.02■□□□□ -0
LIME1-209ENST00000494776 CPEB2Q7Z5Q1 589 aaKnown RBP15.02■□□□□ -0
LIME1-209ENST00000494776 MILR1Q7Z6M3 343 aa15.02■□□□□ -0
LIME1-209ENST00000494776 SLC22A9Q8IVM8 553 aa15.02■□□□□ -0
LIME1-209ENST00000494776 KBTBD2Q8IY47 623 aa15.02■□□□□ -0
LIME1-209ENST00000494776 CA13Q8N1Q1 262 aa15.02■□□□□ -0
LIME1-209ENST00000494776 RIBC1Q8N443 379 aaPredicted RBP15.02■□□□□ -0
LIME1-209ENST00000494776 L3MBTL4Q8NA19 623 aa15.02■□□□□ -0
LIME1-209ENST00000494776 CCDC63Q8NA47 563 aa15.02■□□□□ -0
LIME1-209ENST00000494776 OR52B6Q8NGF0 335 aa15.02■□□□□ -0
LIME1-209ENST00000494776 HUS1BQ8NHY5 278 aa15.02■□□□□ -0
LIME1-209ENST00000494776 MTERF1Q99551 399 aaKnown RBP15.02■□□□□ -0
LIME1-209ENST00000494776 ERVK-6Q9BXR3 956 aa15.02■□□□□ -0
LIME1-209ENST00000494776 LHPPQ9H008 270 aa15.02■□□□□ -0
LIME1-209ENST00000494776 ZNF700Q9H0M5 742 aa15.02■□□□□ -0
LIME1-209ENST00000494776 LANCL2Q9NS86 450 aa15.02■□□□□ -0
LIME1-209ENST00000494776 COL6A6A6NMZ7 2263 aa15.02□□□□□ -0.01
LIME1-209ENST00000494776 PIEZO2Q9H5I5 2752 aa15.02□□□□□ -0.01
LIME1-209ENST00000494776 LOC102723996A0A087X1L8 192 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 FAM227AF5H4B4 570 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 SAP18O00422 153 aaKnown RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 COPEO14579 308 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 SLC28A2O43868 658 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 DLX3O60479 287 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 PRMT3O60678 531 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 DPM1O60762 260 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 SUPT7LO94864 414 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 TBX6O95947 436 aaPredicted RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 OTCP00480 354 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 TUBBP07437 444 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 RPS17P08708 135 aaKnown RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 ICAM2P13598 275 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 KRT4P19013 534 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 TSPAN8P19075 237 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 CERS1P27544 350 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 CDH13P55290 713 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 SOX8P57073 446 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 RUNX2Q13950 521 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 RCN2Q14257 317 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 AGAP7PQ5VUJ5 663 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 KHDRBS2Q5VWX1 349 aaKnown RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 RPS27LQ71UM5 84 aaKnown RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 ANKRD37Q7Z713 158 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 RNF175Q8N4F7 328 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 PLPP5Q8NEB5 264 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 ARMC2Q8NEN0 867 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 ZNF483Q8TF39 744 aaPredicted RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 MTFMTQ96DP5 389 aaKnown RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 MAGEB10Q96LZ2 347 aaPredicted RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 PTCHD1Q96NR3 888 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 AGAP4Q96P64 663 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 SMAD5Q99717 465 aaKnown RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 TBCDQ9BTW9 1192 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 TUBB6Q9BUF5 446 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 NTMT1Q9BV86 223 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 ROPN1BQ9BZX4 212 aaPredicted RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 OR51B5Q9H339 312 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 ROPN1Q9HAT0 212 aaPredicted RBP15.01□□□□□ -0.01
LIME1-209ENST00000494776 MLXIPLQ9NP71 852 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 DMRT3Q9NQL9 472 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 ANAPC2Q9UJX6 822 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 GRID1Q9ULK0 1009 aa15.01□□□□□ -0.01
LIME1-209ENST00000494776 IGHV3-20A0A0C4DH32 117 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms