RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 MAGED4Q96JG8 741 aa12.56□□□□□ -0.4
CTDSP1-212ENST00000494067 ERP44Q9BS26 406 aa12.56□□□□□ -0.4
CTDSP1-212ENST00000494067 PITHD1Q9GZP4 211 aaPredicted RBP12.56□□□□□ -0.4
CTDSP1-212ENST00000494067 CLDN16Q9Y5I7 305 aa12.56□□□□□ -0.4
CTDSP1-212ENST00000494067 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.56□□□□□ -0.4
CTDSP1-212ENST00000494067 SPTBN1Q01082 2364 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 A0A0G2JN53 185 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 SYNDIG1LA6NDD5 238 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 FAM187AA6NFU0 413 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 FAM159BA6NKW6 160 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 ENO4A6NNW6 628 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 S100BP04271 92 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 SP1P08047 785 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 EPORP19235 508 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 CD22P20273 847 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 MAOAP21397 527 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 HNRNPH1P31943 449 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 CA7P43166 264 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 CYB561P49447 251 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 HNRNPFP52597 415 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 BTN3A2P78410 334 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 DLG1Q12959 904 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 RCN2Q14257 317 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 EFTUD2Q15029 972 aaKnown RBP eCLIP12.55□□□□□ -0.47e-10■■■■■ 32.2
CTDSP1-212ENST00000494067 TGFBIQ15582 683 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 MAPKAPK3Q16644 382 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 ZNF468Q5VIY5 522 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 SP5Q6BEB4 398 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 SPINK14Q6IE38 97 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 SLC25A25Q6KCM7 469 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 TMIGD1Q6UXZ0 262 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 RPTNQ6XPR3 784 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 SLCO4C1Q6ZQN7 724 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 MDS2Q8NDY4 140 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 TMEM52Q8NDY8 209 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 ADAMTS18Q8TE60 1221 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 GAL3ST3Q96A11 431 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 NPLQ9BXD5 320 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 DERL2Q9GZP9 239 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 NECTIN3Q9NQS3 549 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 WWOXQ9NZC7 414 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 GPRC5BQ9NZH0 403 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 WHRNQ9P202 907 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 SH3BGRL2Q9UJC5 107 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 ENTPD4Q9Y227 616 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 MRPS33Q9Y291 106 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 MMACHCQ9Y4U1 282 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 RP1L1Q8IWN7 2480 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 CNTRLQ7Z7A1 2325 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 ZGRF1Q86YA3 2104 aa12.55□□□□□ -0.4
CTDSP1-212ENST00000494067 POLEQ07864 2286 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 IGKV3D-11A0A0A0MRZ8 115 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 SAGE2PA6NJ88 616 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 SLC19A2O60779 497 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 CD1DP15813 335 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 SMSP52788 366 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 ATP6V0D1P61421 351 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 TGM3Q08188 693 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 ART3Q13508 389 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 RUNX2Q13950 521 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 SLBPQ14493 270 aaKnown RBP eCLIP12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 ZKSCAN8Q15776 578 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 HIST2H2ACQ16777 129 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 HIST2H2AA3Q6FI13 130 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 TRIM40Q6P9F5 258 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 GALNTL5Q7Z4T8 443 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 ZNF227Q86WZ6 799 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 GPSM1Q86YR5 675 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 LURAP1LQ8IV03 231 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 EID3Q8N140 333 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 CA13Q8N1Q1 262 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 NFAM1Q8NET5 270 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 ELP5Q8TE02 316 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 THAP3Q8WTV1 239 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 SCMH1Q96GD3 660 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 GPR22Q99680 433 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 RBBP8Q99708 897 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 CPNE1Q99829 537 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 CCDC77Q9BR77 488 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 DEFB126Q9BYW3 111 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 COPS7BQ9H9Q2 264 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 TEX15Q9BXT5 2789 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 CRYBG3Q68DQ2 2970 aa12.54□□□□□ -0.4
CTDSP1-212ENST00000494067 CELSR2Q9HCU4 2923 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 ARHGAP10A1A4S6 786 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 A8MUA0 341 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 NPIPA5E9PKD4 350 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 ZNHIT1O43257 154 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 ERI3O43414 337 aaKnown RBP12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 B3GALT2O43825 422 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 SLC25A12O75746 678 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 GSTA2P09210 222 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 CCDC166P0CW27 439 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 STMN1P16949 149 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 TPP2P29144 1249 aaPredicted RBP12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 PPP2R1BP30154 601 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 CLCN2P51788 898 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 SLC13A2Q13183 592 aa12.53□□□□□ -0.4
CTDSP1-212ENST00000494067 LAPTM5Q13571 262 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms