RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 PTPRQQ9UMZ3 2332 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 TRPC5OSA6NMA1 111 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 SLCO1B7G3V0H7 640 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 PLPP1O14494 284 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 DSCR3O14972 297 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 DIAPH2O60879 1101 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 CPNE3O75131 537 aaKnown RBP16.31■□□□□ 0.2
LIME1-208ENST00000493265 PEX11AO75192 247 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 SEC22BO75396 215 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 STK17BO94768 372 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 KLHL18O94889 574 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 GBAP04062 536 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 SLC5A2P31639 672 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 OR1D4P47884 311 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 OLR1P78380 273 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 ZNF33BQ06732 778 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 CUL3Q13618 768 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 HERC3Q15034 1050 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 AP5B1Q2VPB7 878 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 ADPRMQ3LIE5 342 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 GARNL3Q5VVW2 1013 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 ABHD17CQ6PCB6 329 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 MAVSQ7Z434 540 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 PDSS2Q86YH6 399 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 ARHGEF39Q8N4T4 335 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 C1orf52Q8N6N3 182 aaKnown RBP16.31■□□□□ 0.2
LIME1-208ENST00000493265 GALNT6Q8NCL4 622 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.31■□□□□ 0.2
LIME1-208ENST00000493265 TUBGCP3Q96CW5 907 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 CHMP6Q96FZ7 201 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 APIPQ96GX9 242 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 SLC46A1Q96NT5 459 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 TEFMQ96QE5 360 aaKnown RBP16.31■□□□□ 0.2
LIME1-208ENST00000493265 ZPBPQ9BS86 351 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 YIPF2Q9BWQ6 316 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 NRSN2Q9GZP1 204 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 WDR55Q9H6Y2 383 aaPredicted RBP16.31■□□□□ 0.2
LIME1-208ENST00000493265 RIC8BQ9NVN3 520 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 WDR70Q9NW82 654 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 DCTN4Q9UJW0 460 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 SLC22A7Q9Y694 548 aa16.31■□□□□ 0.2
LIME1-208ENST00000493265 A0A1B0GX78 115 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 RRP8O43159 456 aaKnown RBP16.3■□□□□ 0.2
LIME1-208ENST00000493265 FOXS1O43638 330 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 RDH16O75452 317 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 KLK1P06870 262 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 HBQ1P09105 142 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 CERS1P27544 350 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 EPHA3P29320 983 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 AVPR1BP47901 424 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 AQP5P55064 265 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 ACSM2AQ08AH3 577 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 C19orf57Q0VDD7 668 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 SLC9B1Q4ZJI4 515 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 YOD1Q5VVQ6 348 aaPredicted RBP16.3■□□□□ 0.2
LIME1-208ENST00000493265 ACSM2BQ68CK6 577 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 NXNQ6DKJ4 435 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 OR4C11Q6IEV9 310 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 RHBDD2Q6NTF9 364 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 Q6ZSR9 355 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 ZFAND4Q86XD8 727 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 AMER3Q8N944 861 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 SRFBP1Q8NEF9 429 aaKnown RBP16.3■□□□□ 0.2
LIME1-208ENST00000493265 RFWD2Q8NHY2 731 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 SLC39A7Q92504 469 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 COL26A1Q96A83 441 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 ZNF317Q96PQ6 595 aaPredicted RBP16.3■□□□□ 0.2
LIME1-208ENST00000493265 KCNC2Q96PR1 638 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 TBCDQ9BTW9 1192 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 EBPLQ9BY08 206 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 PRORYQ9H606 182 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 LRTM1Q9HBL6 345 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 PSD3Q9NYI0 1048 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 AHSPQ9NZD4 102 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 HCN3Q9P1Z3 774 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 PPT2Q9UMR5 302 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 CCL27Q9Y4X3 112 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 PCDHGA3Q9Y5H0 932 aa16.3■□□□□ 0.2
LIME1-208ENST00000493265 SERTM1A2A2V5 107 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 SDHDO14521 159 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 BRINP1O60477 761 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 GALR3O60755 368 aaPredicted RBP16.29■□□□□ 0.2
LIME1-208ENST00000493265 DNAJB6O75190 326 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 EEDO75530 441 aaKnown RBP16.29■□□□□ 0.2
LIME1-208ENST00000493265 C1QL1O75973 258 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 RSL1D1O76021 490 aaKnown RBP16.29■□□□□ 0.2
LIME1-208ENST00000493265 SMIM10L1P0DMW3 83 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 TROVE2P10155 538 aaKnown RBP eCLIP16.29■□□□□ 0.2
LIME1-208ENST00000493265 SPTBP11277 2137 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 ATP5A1P25705 553 aaKnown RBP16.29■□□□□ 0.2
LIME1-208ENST00000493265 GCGRP47871 477 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 HK2P52789 917 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 EMP3P54852 163 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 RPL38P63173 70 aaKnown RBP16.29■□□□□ 0.2
LIME1-208ENST00000493265 MAT1AQ00266 395 aaKnown RBP16.29■□□□□ 0.2
LIME1-208ENST00000493265 TBL3Q12788 808 aaKnown RBP16.29■□□□□ 0.2
LIME1-208ENST00000493265 RTP5Q14D33 572 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 ATP6AP1LQ52LC2 224 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 XKR7Q5GH72 579 aa16.29■□□□□ 0.2
LIME1-208ENST00000493265 ARHGAP40Q5TG30 622 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms