RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	MAGEA3	P43357	314 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	SCTR	P47872	440 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	CLCN2	P51788	898 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	DLX5	P56178	289 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	MYBPH	Q13203	477 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	SP140	Q13342	867 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	SNTB1	Q13884	538 aa	Known RBP	12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	GXYLT1	Q4G148	440 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	XKR6	Q5GH73	641 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	ARMC3	Q5W041	872 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	DUPD1	Q68J44	220 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	ARHGAP11A	Q6P4F7	1023 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	ABHD13	Q7L211	337 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	CA13	Q8N1Q1	262 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	MYO1H	Q8N1T3	1032 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	INTS1	Q8N201	2190 aa	Known RBP	12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	SPC24	Q8NBT2	197 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	TMEM52	Q8NDY8	209 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	B3GNT7	Q8NFL0	401 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	SMIM10	Q96HG1	83 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	PDLIM2	Q96JY6	352 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	SIGLEC10	Q96LC7	697 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	SLC6A16	Q9GZN6	736 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	PNO1	Q9NRX1	252 aa	Known RBP	12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	ARL15	Q9NXU5	204 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	KCNN3	Q9UGI6	736 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	CLDN16	Q9Y5I7	305 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	LIPG	Q9Y5X9	500 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	MAD1L1	Q9Y6D9	718 aa		12.75	□□□□□ -0.37
SAMM50-204	ENST00000493161	PRRC2A	P48634	2157 aa	Known RBP	12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	NIPBL	Q6KC79	2804 aa	eCLIP	12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	KLK8	O60259	260 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	MLN	P12872	115 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	RGS4	P49798	205 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	GPR143	P51810	404 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	HNRNPF	P52597	415 aa	Known RBP	12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	PPIA	P62937	165 aa	Known RBP	12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	RGS1	Q08116	209 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	CES4A	Q5XG92	561 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	RTL6	Q6ICC9	239 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	KIAA0408	Q6ZU52	694 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	STRA8	Q7Z7C7	330 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	LIX1L	Q8IVB5	337 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	PALM2	Q8IXS6	379 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	MMP21	Q8N119	569 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	C2CD4A	Q8NCU7	369 aa	Predicted RBP	12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	PSD4	Q8NDX1	1056 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	MCU	Q8NE86	351 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	OR5M3	Q8NGP4	307 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	SLC5A11	Q8WWX8	675 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	NCLN	Q969V3	563 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	CXXC4	Q9H2H0	198 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	SLC17A6	Q9P2U8	582 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	FAM215A	Q9Y5M1	114 aa		12.74	□□□□□ -0.37
SAMM50-204	ENST00000493161	ZNF469	Q96JG9	3925 aa	Predicted RBP	12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161		A0A0G2JN53	185 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	MYOCOS	A0A1B0GUC4	107 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	PSMD12	O00232	456 aa	Predicted RBP	12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	OR2J2	O76002	312 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	OR6B1	O95007	311 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	ZWINT	O95229	277 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	GUCA1C	O95843	209 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	TUBB4A	P04350	444 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	HIST1H2AD	P20671	130 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	AHR	P35869	848 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	SSR4	P51571	173 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	SKP1	P63208	163 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	REEP5	Q00765	189 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	RUNX2	Q13950	521 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	CSHL1	Q14406	222 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	TOR1AIP1	Q5JTV8	583 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	LRRC8E	Q6NSJ5	796 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	IL20RB	Q6UXL0	311 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	TGIF2LY	Q8IUE0	185 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	SCUBE1	Q8IWY4	988 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	LMNTD2	Q8IXW0	634 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	OR2M7	Q8NG81	312 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	OR10Q1	Q8NGQ4	319 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	CALML6	Q8TD86	181 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	CREB3L4	Q8TEY5	395 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	MAIP1	Q8WWC4	291 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	FBXL8	Q96CD0	374 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	HIST1H2AH	Q96KK5	128 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	HIST1H2AJ	Q99878	128 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	TTYH2	Q9BSA4	534 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	FAM167B	Q9BTA0	163 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	H2AFJ	Q9BTM1	129 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	GSX1	Q9H4S2	264 aa	Predicted RBP	12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	ZDHHC11	Q9H8X9	412 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	XAB2	Q9HCS7	855 aa	Known RBP	12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	TIMMDC1	Q9NPL8	285 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	TAS2R13	Q9NYV9	303 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	PPIE	Q9UNP9	301 aa	Known RBP	12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	ERVK-11	Q9UQG0	969 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	L3MBTL1	Q9Y468	752 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	DNHD1	Q96M86	4753 aa		12.73	□□□□□ -0.37
SAMM50-204	ENST00000493161	PHF3	Q92576	2039 aa	Known RBP	12.72	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms