RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 TUBB6Q9BUF5 446 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 NTMT1Q9BV86 223 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 MS4A8Q9BY19 250 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 LHPPQ9H008 270 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 ZNF700Q9H0M5 742 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 COPS7BQ9H9Q2 264 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 ZNF160Q9HCG1 818 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 LANCL2Q9NS86 450 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 TMEM216Q9P0N5 145 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 DCDC2Q9UHG0 476 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 PCTPQ9UKL6 214 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 PCDHGA11Q9Y5H2 935 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 MED13Q9UHV7 2174 aa10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 ASH1LQ9NR48 2969 aaKnown RBP10.05□□□□□ -0.8
CDC42SE1-206ENST00000492796 KALRNO60229 2985 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 SYNDIG1LA6NDD5 238 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 MAGEB17A8MXT2 336 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 GOLGA8RI6L899 631 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 K7EM74 188 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 OR7A17O14581 309 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 SLC28A2O43868 658 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 CDC123O75794 336 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 B3GALT4O96024 378 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 SERPINA7P05543 415 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 TUBBP07437 444 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 PYGBP11216 843 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 ICAM2P13598 275 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 CASRP41180 1078 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 TSFMP43897 325 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 SLCO1A2P46721 670 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 CCNG1P51959 295 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 ARFIP1P53367 373 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 MTTPP55157 894 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 BTN3A2P78410 334 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 RHAGQ02094 409 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 RCN2Q14257 317 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 PCOLCEQ15113 449 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 GGTA1PQ4G0N0 100 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 FAAH2Q6GMR7 532 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 IGFL3Q6UXB1 125 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 ATG14Q6ZNE5 492 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 RIPOR1Q6ZS17 1223 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 CHSY3Q70JA7 882 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 PRICKLE2Q7Z3G6 844 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 CPEB2Q7Z5Q1 589 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 SLC22A9Q8IVM8 553 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 KBTBD2Q8IY47 623 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 TEX19Q8NA77 164 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 HUS1BQ8NHY5 278 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 EPS8L3Q8TE67 593 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 QRFPRQ96P65 431 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 SERINC2Q96SA4 455 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 TBCDQ9BTW9 1192 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 RBCK1Q9BYM8 510 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 ZNF552Q9H707 407 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 NOL11Q9H8H0 719 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 PRM3Q9NNZ6 103 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 PSD3Q9NYI0 1048 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 PPT2Q9UMR5 302 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 MRPS33Q9Y291 106 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 MMACHCQ9Y4U1 282 aa10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 TNRC6AQ8NDV7 1962 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 TLN1Q9Y490 2541 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-206ENST00000492796 MAST4O15021 2626 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 CFAP46Q8IYW2 2715 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 SMIM23A6NLE4 172 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 MASP2O00187 686 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 PRMT3O60678 531 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 SCELO95171 688 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 OTCP00480 354 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 PLA2G2AP14555 144 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 ATP5F1P24539 256 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 CERS1P27544 350 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 ARL1P40616 181 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 CCT5P48643 541 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 PLA2G16P53816 162 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 RAB38P57729 211 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 NAA20P61599 178 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 HERVK_113P63132 956 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 IFFO1Q0D2I5 559 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 Q0VFX4 171 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 TRAF3Q13114 568 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 RAPSNQ13702 412 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 ABRAXAS2Q15018 415 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 NSDHLQ15738 373 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 CPSF6Q16630 551 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 ERCC6LQ2NKX8 1250 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 CCDC153Q494R4 210 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 AGAP7PQ5VUJ5 663 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 KHDRBS2Q5VWX1 349 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 JMJD6Q6NYC1 403 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 LANCL3Q6ZV70 420 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 SH2D5Q6ZV89 423 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 ANKRD37Q7Z713 158 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 PARP9Q8IXQ6 854 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 MREGQ8N565 214 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 ARMC2Q8NEN0 867 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 OR52B6Q8NGF0 335 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 WDR20Q8TBZ3 569 aa10.03□□□□□ -0.8
CDC42SE1-206ENST00000492796 ZNF483Q8TF39 744 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms