RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 HSPA7P48741 367 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 HSD17B7P56937 341 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 OLR1P78380 273 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 PHEXP78562 749 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 SRSF11Q05519 484 aaKnown RBP15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 SLC13A2Q13183 592 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 EFTUD2Q15029 972 aaKnown RBP eCLIP15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 ZXDCQ2QGD7 858 aaPredicted RBP15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 KBTBD12Q3ZCT8 623 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 CHSY3Q70JA7 882 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 TAOK1Q7L7X3 1001 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 LRRC70Q7Z2Q7 622 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 BEST3Q8N1M1 668 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 SPATA6LQ8N4H0 392 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 ANKRD53Q8N9V6 530 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 EXT2Q93063 718 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 SLX1AQ9BQ83 275 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 REXO4Q9GZR2 422 aaKnown RBP15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 SMYD2Q9NRG4 433 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 LANCL2Q9NS86 450 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 NUDT4Q9NZJ9 180 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 OPTCQ9UBM4 332 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 ADGRE2Q9UHX3 823 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 ERRFI1Q9UJM3 462 aaPredicted RBP15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 IKZF3Q9UKT9 509 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 NUP210LQ5VU65 1888 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 HECTD1Q9ULT8 2610 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 A1L4Q6 167 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 SUPT3HB4E1H0 165 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 DYRK3O43781 588 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 SUPT3HO75486 399 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 WISP3O95389 354 aaPredicted RBP15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 LDLRP01130 860 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 LTA4HP09960 611 aaKnown RBP15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 KCNC1P48547 511 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 CYB561P49447 251 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 CLCN2P51788 898 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 MTTPP55157 894 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 SLC7A5Q01650 507 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 OR1C1Q15619 314 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 KRTCAP3Q53RY4 240 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 CRLF3Q8IUI8 442 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 ZNF595Q8IYB9 648 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 EID3Q8N140 333 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 OR2L5Q8NG80 312 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 FBF1Q8TES7 1133 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 TSLPQ969D9 159 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 KCNC2Q96PR1 638 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 SERINC2Q96SA4 455 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 CD244Q9BZW8 370 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 UNKQ9C0B0 810 aaKnown RBP15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 CDCP1Q9H5V8 836 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 PRTFDC1Q9NRG1 225 aa15.55■□□□□ 0.08
PDLIM2-217ENST00000491330 LRIT2A6NDA9 550 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 SAGE2PA6NJ88 616 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 GABRR3A8MPY1 467 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 CXorf49A8MYA2 514 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 IFNA16P05015 189 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 EPB42P16452 691 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 TFEBP19484 476 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 PLA2G16P53816 162 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 RAB38P57729 211 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 ALDH6A1Q02252 535 aaKnown RBP15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 STX4Q12846 297 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 TUBA3CQ13748 450 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 ESPL1Q14674 2120 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 TERF2Q15554 542 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 TBCCQ15814 346 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 UAP1Q16222 522 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 AP5B1Q2VPB7 878 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 TMEM35AQ53FP2 167 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 SLC25A25Q6KCM7 469 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 TUBA3EQ6PEY2 450 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 CA13Q8N1Q1 262 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 TMEM132CQ8N3T6 1108 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 PDPRQ8NCN5 879 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 CREB3L4Q8TEY5 395 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 REPS1Q96D71 796 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 UBXN10Q96LJ8 280 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 SPNS1Q9H2V7 528 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 ACSS3Q9H6R3 686 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 ALG9Q9H6U8 611 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 LRFN1Q9P244 771 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 PTBP2Q9UKA9 531 aaKnown RBP15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 CLCA3PQ9Y6N3 262 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 PCSK5Q92824 1860 aa15.54■□□□□ 0.08
PDLIM2-217ENST00000491330 TRGV8A0A0C4DH27 118 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 TCRBV16S1A1N1A0A5B0 115 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 ESYT3A0FGR9 886 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 OR2W5A6NFC9 320 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 WIPF3A6NGB9 483 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 PIAS1O75925 651 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 UNC5CO95185 931 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 STSP08842 583 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 SMIM10L1P0DMW3 83 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 ESRRAP11474 423 aaPredicted RBP15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 GFAPP14136 432 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 TNNI3P19429 210 aa15.53■□□□□ 0.08
PDLIM2-217ENST00000491330 CNTFP26441 200 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms