RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 UBE2E3Q969T4 207 aa12.38□□□□□ -0.43
SHC1-211ENST00000490667 QRFPRQ96P65 431 aa12.38□□□□□ -0.43
SHC1-211ENST00000490667 LPAR4Q99677 370 aa12.38□□□□□ -0.43
SHC1-211ENST00000490667 RHOXF2Q9BQY4 288 aa12.38□□□□□ -0.43
SHC1-211ENST00000490667 NPLQ9BXD5 320 aaPredicted RBP12.38□□□□□ -0.43
SHC1-211ENST00000490667 REXO4Q9GZR2 422 aaKnown RBP12.38□□□□□ -0.43
SHC1-211ENST00000490667 STMN3Q9NZ72 180 aa12.38□□□□□ -0.43
SHC1-211ENST00000490667 ANGPTL3Q9Y5C1 460 aa12.38□□□□□ -0.43
SHC1-211ENST00000490667 A0A088AWK7 358 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 TCP11X1B4DZS4 312 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 B3GALT2O43825 422 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 KLK8O60259 260 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 RBP1P09455 135 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 ZNF10P21506 573 aaPredicted RBP12.37□□□□□ -0.43
SHC1-211ENST00000490667 CNTFP26441 200 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 MAGEA12P43365 314 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 TSFMP43897 325 aaKnown RBP12.37□□□□□ -0.43
SHC1-211ENST00000490667 UQCRFS1P47985 274 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 ALDH18A1P54886 795 aaKnown RBP12.37□□□□□ -0.43
SHC1-211ENST00000490667 UBAP2LQ14157 1087 aaKnown RBP12.37□□□□□ -0.43
SHC1-211ENST00000490667 E2F2Q14209 437 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 SETDB1Q15047 1291 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 EXT1Q16394 746 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 ABHD17BQ5VST6 288 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 MED27Q6P2C8 311 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 TRIM40Q6P9F5 258 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 ABHD17CQ6PCB6 329 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 PAPD4Q6PIY7 484 aaKnown RBP12.37□□□□□ -0.43
SHC1-211ENST00000490667 QSOX2Q6ZRP7 698 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 CYP4X1Q8N118 509 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 PLD6Q8N2A8 252 aaKnown RBP12.37□□□□□ -0.43
SHC1-211ENST00000490667 OR1N1Q8NGS0 311 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 DCAKDQ8WVC6 231 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 ISL2Q96A47 359 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 MAGEB10Q96LZ2 347 aaPredicted RBP12.37□□□□□ -0.43
SHC1-211ENST00000490667 F2RL3Q96RI0 385 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 SLC29A3Q9BZD2 475 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 KCNK13Q9HB14 408 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 PRM3Q9NNZ6 103 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 PRDM9Q9NQV7 894 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 ZNF358Q9NW07 568 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 TEKT2Q9UIF3 430 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 ZNF180Q9UJW8 692 aa12.37□□□□□ -0.43
SHC1-211ENST00000490667 TNRC6AQ8NDV7 1962 aaKnown RBP12.36□□□□□ -0.43
SHC1-211ENST00000490667 TRIM49D1C9J1S8 452 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 WDPCPO95876 746 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 F10P00742 488 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 PCNAP12004 261 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 COL6A2P12110 1019 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 MAOAP21397 527 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 MTTPP55157 894 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 TGM3Q08188 693 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 NAA30Q147X3 362 aaPredicted RBP12.36□□□□□ -0.43
SHC1-211ENST00000490667 PCBP2Q15366 365 aaKnown RBP eCLIP12.36□□□□□ -0.43
SHC1-211ENST00000490667 LGSNQ5TDP6 509 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 H3F3CQ6NXT2 135 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 TRMT10CQ7L0Y3 403 aaKnown RBP12.36□□□□□ -0.43
SHC1-211ENST00000490667 LAS2Q8IYD9 372 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 ARMC2Q8NEN0 867 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 OR7G3Q8NG95 312 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 ZNF473Q8WTR7 871 aaKnown RBP12.36□□□□□ -0.43
SHC1-211ENST00000490667 ZNF354BQ96LW1 612 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 SERINC2Q96SA4 455 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 BARD1Q99728 777 aaKnown RBP12.36□□□□□ -0.43
SHC1-211ENST00000490667 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.36□□□□□ -0.43
SHC1-211ENST00000490667 MMP25Q9NPA2 562 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 NECTIN3Q9NQS3 549 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 PRDM7Q9NQW5 492 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 CPSF2Q9P2I0 782 aaKnown RBP12.36□□□□□ -0.43
SHC1-211ENST00000490667 NTNG1Q9Y2I2 539 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 TNPO3Q9Y5L0 923 aaKnown RBP12.36□□□□□ -0.43
SHC1-211ENST00000490667 HEATR5BQ9P2D3 2071 aa12.36□□□□□ -0.43
SHC1-211ENST00000490667 UBR5O95071 2799 aaPredicted RBP12.35□□□□□ -0.43
SHC1-211ENST00000490667 IGKV3D-11A0A0A0MRZ8 115 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 EXOC1LA0A1B0GW35 172 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 CLEC18AA5D8T8 446 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 LRRC14BA6NHZ5 514 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 A8MUA0 341 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 CLDN4O14493 209 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 CBX6O95503 412 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 TGFB1P01137 390 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 ABHD2P08910 425 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 SNRPAP09012 282 aaKnown RBP12.35□□□□□ -0.43
SHC1-211ENST00000490667 FAM153BP0C7A2 387 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 SERPINB1P30740 379 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 TNFSF10P50591 281 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 RAB38P57729 211 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 SLC26A5P58743 744 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 ZNF33BQ06732 778 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 SRSF1Q07955 248 aaKnown RBP eCLIP12.35□□□□□ -0.43
SHC1-211ENST00000490667 EIF2S3LQ2VIR3 472 aaKnown RBP12.35□□□□□ -0.43
SHC1-211ENST00000490667 FAM153CQ494X1 144 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 TMEM35AQ53FP2 167 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 TECRLQ5HYJ1 363 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 ACER2Q5QJU3 275 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 LIPJQ5W064 366 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 FCRLBQ6BAA4 426 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 GRHL2Q6ISB3 625 aa12.35□□□□□ -0.43
SHC1-211ENST00000490667 RPUSD3Q6P087 351 aaKnown RBP12.35□□□□□ -0.43
SHC1-211ENST00000490667 CLEC18BQ6UXF7 455 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms