RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 MS4A18Q3C1V0 323 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 LRRC37A5PQ49AS3 106 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 PAQR6Q6TCH4 344 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 GDPGP1Q6ZNW5 385 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 HOOK3Q86VS8 718 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 NLRP14Q86W24 1093 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 ZFAND4Q86XD8 727 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 TEX26Q8N6G2 289 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 SPC24Q8NBT2 197 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 UXS1Q8NBZ7 420 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 OR9Q2Q8NGE9 314 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 GDAP1Q8TB36 358 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 PCDHB18PQ96TA0 734 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 ATG101Q9BSB4 218 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 IDI2Q9BXS1 227 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 MTIF3Q9H2K0 278 aaKnown RBP4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 TMEM161AQ9NX61 479 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 KLK11Q9UBX7 282 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 TBK1Q9UHD2 729 aa4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 MTF2Q9Y483 593 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P38-201ENST00000490557 SYNRGQ9UMZ2 1314 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 A8MXK9 166 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 SCO2O43819 266 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 CRCPO75575 148 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 SLC4A1P02730 911 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 SUPT20HL2P0C7V6 817 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 MYOGP15173 224 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 PKLRP30613 574 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 KCNJ1P48048 391 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 RPP38P78345 283 aaKnown RBP4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 GCKRQ14397 625 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 MAPK11Q15759 364 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 PARP10Q53GL7 1025 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 ZRANB3Q5FWF4 1079 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 TCEAL6Q6IPX3 200 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 KLHL10Q6JEL2 608 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 SLC27A4Q6P1M0 643 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 ALKBH5Q6P6C2 394 aaKnown RBP4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 C11orf88Q6PI97 169 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 UNC5DQ6UXZ4 953 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 C5orf24Q7Z6I8 188 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 TUSC5Q8IXB3 177 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 SMYD1Q8NB12 490 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 C11orf45Q8TAV5 145 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 MIPOL1Q8TD10 442 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 LRRC15Q8TF66 581 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 CKAP2Q8WWK9 683 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 TAF4BQ92750 862 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 GAL3ST4Q96RP7 486 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 C17orf62Q9BQA9 187 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 MLPHQ9BV36 600 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 SEPT10Q9P0V9 454 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 MOSPD1Q9UJG1 213 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 BLOC1S6Q9UL45 172 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 ITM2BQ9Y287 266 aa4.07□□□□□ -1.76
HMGB1P38-201ENST00000490557 CCDC69A6NI79 296 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 POP4O95707 220 aaKnown RBP4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 HPRP00739 348 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 P4HA1P13674 534 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 FEN1P39748 380 aaKnown RBP4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 IER3P46695 156 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 HMGN5P82970 282 aaKnown RBP4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 AKAP17AQ02040 695 aaKnown RBP4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 ENPP2Q13822 863 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 KIAA0141Q14154 515 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 SLMAPQ14BN4 828 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 IQCCQ4KMZ1 466 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 SPANXN4Q5MJ08 99 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 ABRAXAS1Q6UWZ7 409 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 C3P1Q6ZMU1 363 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 CDHR3Q6ZTQ4 885 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 RFPL4BQ6ZWI9 263 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 Q71RC1 249 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 OTUD6BQ8N6M0 293 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 OR5M9Q8NGP3 310 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 NPRL2Q8WTW4 380 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 LURAP1Q96LR2 239 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 PAPOLGQ9BWT3 736 aaKnown RBP4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 TRIM7Q9C029 511 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 CUEDC2Q9H467 287 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 KCNK13Q9HB14 408 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 TUFT1Q9NNX1 390 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 HPF1Q9NWY4 346 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 DCAF16Q9NXF7 216 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 SLCO1C1Q9NYB5 712 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 DNAJB9Q9UBS3 223 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 FBXL5Q9UKA1 691 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 RRP15Q9Y3B9 282 aaKnown RBP4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 HBS1LQ9Y450 684 aaKnown RBP4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 IKBKGQ9Y6K9 419 aa4.06□□□□□ -1.76
HMGB1P38-201ENST00000490557 ABCC9O60706 1549 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 NEDD4P46934 1319 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 IGHV4-30-2A0A087WSY4 118 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 TRAFD1O14545 582 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 INPP4BO15327 924 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 SIGLEC5O15389 551 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 CRLF1O75462 422 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 ADORA3P0DMS8 318 aa4.05□□□□□ -1.76
HMGB1P38-201ENST00000490557 HLA-DPA1P20036 260 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms