RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 DEFB134Q4QY38 66 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 RTL4Q6ZR62 310 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 LUZP2Q86TE4 346 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 ASPGQ86U10 573 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 MEIOBQ8N635 442 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 NEIL3Q8TAT5 605 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 SLC13A3Q8WWT9 602 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 PIK3IP1Q96FE7 263 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 ZNF778Q96MU6 729 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 NAP1L5Q96NT1 182 aaPredicted RBP12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 CCDC77Q9BR77 488 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 PIGQQ9BRB3 760 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 P2RY12Q9H244 342 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 SACM1LQ9NTJ5 587 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 MARCH4Q9P2E8 410 aaPredicted RBP12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 TESMINQ9Y4I5 508 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 KPNA5O15131 536 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 SPRY1O43609 319 aaPredicted RBP12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 GALR3O60755 368 aaPredicted RBP12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 ZFAND5O76080 213 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 STK10O94804 968 aaKnown RBP12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 COMTP21964 271 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 CTNNA2P26232 953 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 PPP2R1BP30154 601 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 OPRM1P35372 400 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 PPARGP37231 505 aaPredicted RBP12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 PIGAP37287 484 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 GPR143P51810 404 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 HERC3Q15034 1050 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 C20orf204Q6ZNR8 217 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 LRRC56Q8IYG6 542 aaPredicted RBP12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 AFAP1L2Q8N4X5 818 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 ZNF740Q8NDX6 193 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 FAM136AQ96C01 138 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 THAP11Q96EK4 314 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 HSPBAP1Q96EW2 488 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 MRFAP1L1Q96HT8 127 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 PDLIM2Q96JY6 352 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 PPP1R2P1Q96PQ5 205 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 FERMT1Q9BQL6 677 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 ZNF703Q9H7S9 590 aaPredicted RBP12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 LRRC40Q9H9A6 602 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 PRDM9Q9NQV7 894 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 PNO1Q9NRX1 252 aaKnown RBP12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 ZFATQ9P243 1243 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 MYOTQ9UBF9 498 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 SH2B3Q9UQQ2 575 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 ATG4BQ9Y4P1 393 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 ROS1P08922 2347 aa12.6□□□□□ -0.39
EXOSC3-207ENST00000490516 TGP01266 2768 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 C15orf38-AP3S2A0A0A6YYH1 394 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 ZNF839A8K0R7 811 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 APOC4-APOC2K7ER74 178 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 CTIFO43310 598 aaKnown RBP12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 SPOPO43791 374 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 ZNF354AO60765 605 aaPredicted RBP12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 PSIP1O75475 530 aaKnown RBP12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 METTL18O95568 372 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 APOC2P02655 101 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 P04436 131 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 TMEM253P0C7T8 217 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 HSD17B2P37059 387 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 CPA2P48052 419 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 GBX1Q14549 363 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 WIPI1Q5MNZ9 446 aaPredicted RBP12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 TSTD2Q5T7W7 516 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 RNF187Q5TA31 235 aaPredicted RBP12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 HECTD2Q5U5R9 776 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 NSUN5P2Q63ZY6 315 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 CAPN13Q6MZZ7 669 aaPredicted RBP12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 BBS12Q6ZW61 710 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 CDKL3Q8IVW4 592 aaPredicted RBP12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 LIX1Q8N485 282 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 ACTL9Q8TC94 416 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 IGFBPL1Q8WX77 278 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 HS3ST6Q96QI5 342 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 PLA2G12AQ9BZM1 189 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 AMBRA1Q9C0C7 1298 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 RHBGQ9H310 441 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 NDRG3Q9UGV2 375 aa12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 PPIEQ9UNP9 301 aaKnown RBP12.59□□□□□ -0.39
EXOSC3-207ENST00000490516 MACROD2A1Z1Q3 448 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 ERN1O75460 977 aaKnown RBP12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 SYF2O95926 243 aaKnown RBP12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 SLC35G6P0C7Q6 338 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 RBP3P10745 1247 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 PAX1P15863 534 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 SLC1A1P43005 524 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 MARCKSL1P49006 195 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 HK2P52789 917 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 ATP5J2P56134 94 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 EIF3EP60228 445 aaKnown RBP12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 CRYZQ08257 329 aaKnown RBP12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 FOXF2Q12947 444 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 VEZF1Q14119 521 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 KCNJ11Q14654 390 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 CTSL3PQ5NE16 218 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms