RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 MRPS33Q9Y291 106 aaKnown RBP16.41■□□□□ 0.22
SEC13-218ENST00000490283 ANGPTL3Q9Y5C1 460 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 LRIT2A6NDA9 550 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 OR5H15A6NDH6 313 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 K7EPI3 171 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 UBXN8O00124 270 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 CBX6O95503 412 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 ACSL3O95573 720 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 C2P06681 752 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 GFAPP14136 432 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 CHIT1Q13231 466 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 TBCCQ15814 346 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 MEP1AQ16819 746 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 SHISA5Q8N114 240 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 CA13Q8N1Q1 262 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 NOA1Q8NC60 698 aaKnown RBP16.4■□□□□ 0.22
SEC13-218ENST00000490283 SRFBP1Q8NEF9 429 aaKnown RBP16.4■□□□□ 0.22
SEC13-218ENST00000490283 OR2L5Q8NG80 312 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 RHEBL1Q8TAI7 183 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 KCTD4Q8WVF5 259 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 FAR1Q8WVX9 515 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 NXNL1Q96CM4 212 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 MS4A6EQ96DS6 147 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 WDR34Q96EX3 536 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 ATOH8Q96SQ7 321 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 ROGDIQ9GZN7 287 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 CDC42EP4Q9H3Q1 356 aaKnown RBP16.4■□□□□ 0.22
SEC13-218ENST00000490283 NTNG1Q9Y2I2 539 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 MMACHCQ9Y4U1 282 aa16.4■□□□□ 0.22
SEC13-218ENST00000490283 DOCK10Q96BY6 2186 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 A0A096LPK6 155 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 A0A0G2JN53 185 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 CLDN4O14493 209 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 F10P00742 488 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 EPB42P16452 691 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 SERPINB1P30740 379 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 HNRNPH1P31943 449 aaKnown RBP16.39■□□□□ 0.21
SEC13-218ENST00000490283 GMPRP36959 345 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 PLA2G16P53816 162 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 SLC26A5P58743 744 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 SRSF1Q07955 248 aaKnown RBP eCLIP16.39■□□□□ 0.21
SEC13-218ENST00000490283 DLG1Q12959 904 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 ACAP2Q15057 778 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 ACER2Q5QJU3 275 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 CEP112Q8N8E3 955 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 ST6GALNAC3Q8NDV1 305 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 SSC4DQ8WTU2 575 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 UBTD2Q8WUN7 234 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 BARD1Q99728 777 aaKnown RBP16.39■□□□□ 0.21
SEC13-218ENST00000490283 VPS11Q9H270 941 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 OLAHQ9NV23 265 aa16.39■□□□□ 0.21
SEC13-218ENST00000490283 DMGDHQ9UI17 866 aaKnown RBP16.39■□□□□ 0.21
SEC13-218ENST00000490283 SCN3AQ9NY46 2000 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 BLACEA4D250 179 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 SYNDIG1LA6NDD5 238 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 C4orf51C9J302 202 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 PRAMEF2O60811 474 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 DNAJB6O75190 326 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 KLHL2O95198 593 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 PCNAP12004 261 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 EDN3P14138 238 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 MAOAP21397 527 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 MSH2P43246 934 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 KCNC1P48547 511 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 SERPINB9P50453 376 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 MTTPP55157 894 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 RAB38P57729 211 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 BTG2P78543 158 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 IRF9Q00978 393 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 MED27Q6P2C8 311 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 CENPLQ8N0S6 344 aaPredicted RBP16.38■□□□□ 0.21
SEC13-218ENST00000490283 KCNC2Q96PR1 638 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 SERINC2Q96SA4 455 aa16.38■□□□□ 0.21
SEC13-218ENST00000490283 UTP23Q9BRU9 249 aaKnown RBP16.38■□□□□ 0.21
SEC13-218ENST00000490283 SHANK1Q9Y566 2161 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 TCRBV16S1A1N1A0A5B0 115 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 SAGE2PA6NJ88 616 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 FAM227AF5H4B4 570 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 KRT38O76015 456 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 RASAL1O95294 804 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 CASP2P42575 452 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 PHEXP78562 749 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 SLC13A2Q13183 592 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 ADPRMQ3LIE5 342 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 FCRLBQ6BAA4 426 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 H3F3CQ6NXT2 135 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 CHSY3Q70JA7 882 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 MYLK4Q86YV6 388 aaPredicted RBP16.37■□□□□ 0.21
SEC13-218ENST00000490283 CRLF3Q8IUI8 442 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 BEST3Q8N1M1 668 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 TEX9Q8N6V9 391 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 HORMAD2Q8N7B1 307 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 SLC44A1Q8WWI5 657 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 CENPKQ9BS16 269 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 FUT8Q9BYC5 575 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 AICDAQ9GZX7 198 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 PRTFDC1Q9NRG1 225 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 ADGRE2Q9UHX3 823 aa16.37■□□□□ 0.21
SEC13-218ENST00000490283 ZNF490Q9ULM2 529 aaPredicted RBP16.37■□□□□ 0.21
SEC13-218ENST00000490283 TNPO3Q9Y5L0 923 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms