RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GLI4P10075 376 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 RNH1P13489 461 aaKnown RBP12.99□□□□□ -0.33
VARS-227ENST00000489979 DNASE1P24855 282 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 HNF4AP41235 474 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 SLC1A2P43004 574 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 KCNJ1P48048 391 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 SSR4P51571 173 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 RAB8AP61006 207 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 DRICH1Q6PGQ1 229 aaPredicted RBP12.99□□□□□ -0.33
VARS-227ENST00000489979 ARSKQ6UWY0 536 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 B3GNT6Q6ZMB0 384 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 C16orf47Q6ZP98 133 aaPredicted RBP12.99□□□□□ -0.33
VARS-227ENST00000489979 LIX1LQ8IVB5 337 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 PALM2Q8IXS6 379 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 OR2M7Q8NG81 312 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 OR4K1Q8NGD4 311 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 CREB3L4Q8TEY5 395 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 EEF1AKMT1Q8WVE0 214 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 PYCR2Q96C36 320 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 VMP1Q96GC9 406 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 SMC6Q96SB8 1091 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 HAUS8Q9BT25 410 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 AARSD1Q9BTE6 412 aaKnown RBP12.99□□□□□ -0.33
VARS-227ENST00000489979 TTTY12Q9BZ98 90 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 SPNS1Q9H2V7 528 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 CLEC4MQ9H2X3 399 aaPredicted RBP12.99□□□□□ -0.33
VARS-227ENST00000489979 ZDHHC11Q9H8X9 412 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 PNO1Q9NRX1 252 aaKnown RBP12.99□□□□□ -0.33
VARS-227ENST00000489979 SAMD15Q9P1V8 674 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 Q9UFV3 132 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 TRMT6Q9UJA5 497 aaKnown RBP12.99□□□□□ -0.33
VARS-227ENST00000489979 RPH3AQ9Y2J0 694 aaPredicted RBP12.99□□□□□ -0.33
VARS-227ENST00000489979 FAM215AQ9Y5M1 114 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 LIPGQ9Y5X9 500 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 COMMD10Q9Y6G5 202 aa12.99□□□□□ -0.33
VARS-227ENST00000489979 A0A0G2JMM0 328 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 A0A1W2PPB8 328 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 A0A1W2PRS3 328 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 A8MVJ9 347 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 KIR3DP1A8MWS1 328 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 BCKDKO14874 412 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 PRKNO60260 465 aaPredicted RBP12.98□□□□□ -0.33
VARS-227ENST00000489979 HAUS5O94927 633 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 FOSL1P15407 271 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 SCTRP47872 440 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 PHKG1Q16816 387 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 CATSPEREQ5SY80 951 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 ARMC3Q5W041 872 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 RTL6Q6ICC9 239 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 LRRC8EQ6NSJ5 796 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 RGS9BPQ6ZS82 235 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 STRA8Q7Z7C7 330 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 CAND1Q86VP6 1230 aaKnown RBP12.98□□□□□ -0.33
VARS-227ENST00000489979 SLC22A16Q86VW1 577 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 TXLNBQ8N3L3 684 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 TBC1D19Q8N5T2 526 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 NCLNQ969V3 563 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 RMND5BQ96G75 393 aaPredicted RBP12.98□□□□□ -0.33
VARS-227ENST00000489979 SNF8Q96H20 258 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 PDLIM2Q96JY6 352 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 OR4K3Q96R72 315 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 CCDC77Q9BR77 488 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 LIN28AQ9H9Z2 209 aaKnown RBP12.98□□□□□ -0.33
VARS-227ENST00000489979 CLK4Q9HAZ1 481 aaKnown RBP12.98□□□□□ -0.33
VARS-227ENST00000489979 RASSF1Q9NS23 344 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 HPF1Q9NWY4 346 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 ZFP69BQ9UJL9 534 aa12.98□□□□□ -0.33
VARS-227ENST00000489979 YARS2Q9Y2Z4 477 aaKnown RBP12.98□□□□□ -0.33
VARS-227ENST00000489979 HRNRQ86YZ3 2850 aaPredicted RBP12.98□□□□□ -0.33
VARS-227ENST00000489979 ZCWPW2A0A1B0GU75 182 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 CTAGE15A4D2H0 777 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 OR14I1A6ND48 311 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 G3V3Y1 287 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 OR2J2O76002 312 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 ZFAND5O76080 213 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 PTMSP20962 102 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 AHRP35869 848 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 ADH7P40394 386 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 KIR2DL3P43628 341 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 RGS4P49798 205 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 GPR143P51810 404 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 DGKQP52824 942 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 ADAM8P78325 824 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 SARNPP82979 210 aaKnown RBP12.97□□□□□ -0.33
VARS-227ENST00000489979 TIAL1Q01085 375 aaKnown RBP eCLIP12.97□□□□□ -0.33
VARS-227ENST00000489979 DHX9Q08211 1270 aaKnown RBP12.97□□□□□ -0.33
VARS-227ENST00000489979 SP140Q13342 867 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 TERF2Q15554 542 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 TRIP13Q15645 432 aaPredicted RBP12.97□□□□□ -0.33
VARS-227ENST00000489979 XKR6Q5GH73 641 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 ANKRD22Q5VYY1 191 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 IL20RBQ6UXL0 311 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 TRILQ7L0X0 811 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 WDR53Q7Z5U6 358 aaPredicted RBP12.97□□□□□ -0.33
VARS-227ENST00000489979 CTAGE6Q86UF2 777 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 CA13Q8N1Q1 262 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 ASB15Q8WXK1 588 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 ALPK1Q96QP1 1244 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 NDNQ99608 321 aa12.97□□□□□ -0.33
VARS-227ENST00000489979 BAG1Q99933 345 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms