RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 TCEAL6Q6IPX3 200 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 SHQ1Q6PI26 577 aaKnown RBP4.07□□□□□ -1.76
CCDC39-206ENST00000489868 RNF130Q86XS8 419 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 FBXL16Q8N461 479 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 UXS1Q8NBZ7 420 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 SMPDL3AQ92484 453 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 DNASE1L2Q92874 299 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 MR1Q95460 341 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 NABP1Q96AH0 204 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 C1orf147Q96MC9 270 aaPredicted RBP4.07□□□□□ -1.76
CCDC39-206ENST00000489868 ZMAT2Q96NC0 199 aaKnown RBP4.07□□□□□ -1.76
CCDC39-206ENST00000489868 OCR1Q9BZK8 76 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 DBF4Q9UBU7 674 aaPredicted RBP4.07□□□□□ -1.76
CCDC39-206ENST00000489868 RARRES3Q9UL19 164 aa4.07□□□□□ -1.76
CCDC39-206ENST00000489868 AGRNO00468 2067 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 HCFC1P51610 2035 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 SERINC4A6NH21 518 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 ANKDD1BA6NHY2 528 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 ANGPTL1O95841 491 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 ADORA3P0DMS8 318 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 ZFP36L2P47974 494 aaKnown RBP4.06□□□□□ -1.76
CCDC39-206ENST00000489868 GSK3BP49841 420 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 BACE1P56817 501 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 CNTN1Q12860 1018 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 PPA1Q15181 289 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 ZRANB3Q5FWF4 1079 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 SLC25A30Q5SVS4 291 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 TEX35Q5T0J7 233 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 SPOUT1Q5T280 376 aaKnown RBP4.06□□□□□ -1.76
CCDC39-206ENST00000489868 SLC27A4Q6P1M0 643 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 REG3GQ6UW15 175 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 Q71RC1 249 aaPredicted RBP4.06□□□□□ -1.76
CCDC39-206ENST00000489868 VSIG1Q86XK7 387 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 DZIP1Q86YF9 867 aaKnown RBP4.06□□□□□ -1.76
CCDC39-206ENST00000489868 SLC39A11Q8N1S5 342 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 TOMM40LQ969M1 308 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 TAAR6Q96RI8 345 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 SLC7A10Q9NS82 523 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 PRR34Q9NV39 138 aa4.06□□□□□ -1.76
CCDC39-206ENST00000489868 CTDSPLO15194 276 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 RLN1P04808 185 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 PIK3R1P27986 724 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 NOVP48745 357 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 RPP38P78345 283 aaKnown RBP4.05□□□□□ -1.76
CCDC39-206ENST00000489868 SRPXP78539 464 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 MCM10Q7L590 875 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.05□□□□□ -1.76
CCDC39-206ENST00000489868 RTL3Q8N8U3 475 aaKnown RBP4.05□□□□□ -1.76
CCDC39-206ENST00000489868 SMYD1Q8NB12 490 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 SLC35C1Q96A29 364 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 ERO1AQ96HE7 468 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 MRPL17Q9NRX2 175 aaKnown RBP4.05□□□□□ -1.76
CCDC39-206ENST00000489868 GMEB2Q9UKD1 530 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 TSPAN16Q9UKR8 245 aa4.05□□□□□ -1.76
CCDC39-206ENST00000489868 TRGV8A0A0C4DH27 118 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 TRBV5-4A0A0C4DH59 114 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 IQCMA0A1B0GVH7 501 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 RPL37AP8A6NKH3 93 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 YDJCA8MPS7 323 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 P2RX6O15547 441 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 OR6B1O95007 311 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 CALCAP01258 141 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 KRT3P12035 628 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 CD1DP15813 335 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 LMO2P25791 158 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 ABRQ12979 859 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 GCKRQ14397 625 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 C15orf32Q32M92 178 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 HIGD2BQ4VC39 106 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 EIPR1Q53HC9 387 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 ARMCX4Q5H9R4 360 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 FAM182AQ5T1J6 154 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 C9orf66Q5T8R8 295 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 PM20D1Q6GTS8 502 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 PODNL1Q6PEZ8 512 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 Q6ZR54 194 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 CEACAM19Q7Z692 300 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 RPAINQ86UA6 219 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 ANKRD46Q86W74 232 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 SLC43A2Q8N370 569 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 OR4Q3Q8NH05 313 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 BPIFA2Q96DR5 249 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 ATG101Q9BSB4 218 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 NACAP1Q9BZK3 213 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 SLC39A8Q9C0K1 460 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 LSG1Q9H089 658 aaKnown RBP4.04□□□□□ -1.76
CCDC39-206ENST00000489868 WDR41Q9HAD4 459 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 DNAJB9Q9UBS3 223 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 ITGA11Q9UKX5 1188 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 ZNF346Q9UL40 294 aaKnown RBP4.04□□□□□ -1.76
CCDC39-206ENST00000489868 GPR132Q9UNW8 380 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 TMED7Q9Y3B3 224 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 ABCA7Q8IZY2 2146 aa4.04□□□□□ -1.76
CCDC39-206ENST00000489868 ADAMTS9Q9P2N4 1935 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 SALL1Q9NSC2 1324 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 IGHV3-16A0A0C4DH30 117 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 ILVBLA1L0T0 632 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 H0YIG0 161 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 PDHXO00330 501 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 SLC30A4O14863 429 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms