RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 OR52B2Q96RD2 323 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 EBF4Q9BQW3 602 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 SIKE1Q9BRV8 207 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 ZPBPQ9BS86 351 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 TBCDQ9BTW9 1192 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 NDC1Q9BTX1 674 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 TRIM55Q9BYV6 548 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 ASPSCR1Q9BZE9 553 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 NRSN2Q9GZP1 204 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 WDR55Q9H6Y2 383 aaPredicted RBP10.34□□□□□ -0.75
TFF3-203ENST00000489676 DDX31Q9H8H2 851 aaKnown RBP10.34□□□□□ -0.75
TFF3-203ENST00000489676 AKTIPQ9H8T0 292 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 ACTR5Q9H9F9 607 aaPredicted RBP10.34□□□□□ -0.75
TFF3-203ENST00000489676 LRTM1Q9HBL6 345 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 RIC8BQ9NVN3 520 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 IRAK4Q9NWZ3 460 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 C1orf109Q9NX04 203 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 DLGAP4Q9Y2H0 992 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 PCDHGA7Q9Y5G6 932 aa10.34□□□□□ -0.75
TFF3-203ENST00000489676 CFAP47Q6ZTR5 3102 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 A0A0G2JN53 185 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 GMNCA6NCL1 334 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 ZNF860A6NHJ4 632 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 TMPRSS11DO60235 418 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 CPNE3O75131 537 aaKnown RBP10.33□□□□□ -0.76
TFF3-203ENST00000489676 TNFSF15O95150 251 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 TROVE2P10155 538 aaKnown RBP eCLIP10.33□□□□□ -0.76
TFF3-203ENST00000489676 ACPPP15309 386 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 HIST1H1TP22492 207 aaPredicted RBP10.33□□□□□ -0.76
TFF3-203ENST00000489676 ATP5A1P25705 553 aaKnown RBP10.33□□□□□ -0.76
TFF3-203ENST00000489676 TPP2P29144 1249 aaPredicted RBP10.33□□□□□ -0.76
TFF3-203ENST00000489676 TIA1P31483 386 aaKnown RBP eCLIP10.33□□□□□ -0.76
TFF3-203ENST00000489676 SSR2P43308 183 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 RAP1GDS1P52306 607 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 MTTPP55157 894 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 RPL38P63173 70 aaKnown RBP10.33□□□□□ -0.76
TFF3-203ENST00000489676 FOXC1Q12948 553 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 IMPG1Q17R60 797 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 SMU1Q2TAY7 513 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 AP5B1Q2VPB7 878 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 ATP6AP1LQ52LC2 224 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 RFTN2Q52LD8 501 aaPredicted RBP10.33□□□□□ -0.76
TFF3-203ENST00000489676 OR4C11Q6IEV9 310 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 MRM1Q6IN84 353 aaKnown RBP10.33□□□□□ -0.76
TFF3-203ENST00000489676 ZNF517Q6ZMY9 492 aaPredicted RBP10.33□□□□□ -0.76
TFF3-203ENST00000489676 TTLL10Q6ZVT0 673 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 COX15Q7KZN9 410 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 NUDT13Q86X67 352 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 SHISA5Q8N114 240 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 ZCCHC7Q8N3Z6 543 aaKnown RBP10.33□□□□□ -0.76
TFF3-203ENST00000489676 OR9A4Q8NGU2 314 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 ACTRT2Q8TDY3 377 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 C10orf82Q8WW14 230 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 TUBGCP3Q96CW5 907 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 RNF31Q96EP0 1072 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 THOC1Q96FV9 657 aaKnown RBP10.33□□□□□ -0.76
TFF3-203ENST00000489676 PPP3R2Q96LZ3 170 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 SLC46A1Q96NT5 459 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 CENPKQ9BS16 269 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 ULBP3Q9BZM4 244 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 PFDN4Q9NQP4 134 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 SLC22A11Q9NSA0 550 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 NMRK1Q9NWW6 199 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 ASIC5Q9NY37 505 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 KLHL14Q9P2G3 628 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 DCTN4Q9UJW0 460 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 ADAM29Q9UKF5 820 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 ACSL6Q9UKU0 697 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 TMED5Q9Y3A6 229 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 NAALAD2Q9Y3Q0 740 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 NUP210LQ5VU65 1888 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 CHD6Q8TD26 2715 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 SCN3AQ9NY46 2000 aa10.33□□□□□ -0.76
TFF3-203ENST00000489676 A0A0A6YYC8 382 aaPredicted RBP10.32□□□□□ -0.76
TFF3-203ENST00000489676 GOLGA8QA0A0J9YX86 632 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 GOLGA8OA6NCC3 632 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 GOLGA8NF8WBI6 632 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 H0YIG0 161 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 I3L1I5 382 aaPredicted RBP10.32□□□□□ -0.76
TFF3-203ENST00000489676 NVLO15381 856 aaKnown RBP10.32□□□□□ -0.76
TFF3-203ENST00000489676 DIAPH2O60879 1101 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 DNAJB6O75190 326 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 PEX11AO75192 247 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 VPS4BO75351 444 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 RDH16O75452 317 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 STK17BO94768 372 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 KIAA0754O94854 1291 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 NTRK1P04629 796 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 HBQ1P09105 142 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 ALDOCP09972 364 aaKnown RBP10.32□□□□□ -0.76
TFF3-203ENST00000489676 SPINK2P20155 84 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 ERVK-8P63133 956 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 BTN3A2P78410 334 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 TGM3Q08188 693 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 ACSM2AQ08AH3 577 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 DSG2Q14126 1118 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 LSM12Q3MHD2 195 aaKnown RBP10.32□□□□□ -0.76
TFF3-203ENST00000489676 SPDYAQ5MJ70 313 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 ACSM2BQ68CK6 577 aa10.32□□□□□ -0.76
TFF3-203ENST00000489676 NIPAL1Q6NVV3 410 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms