RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CCDC3Q9BQI4 270 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 SORBS1Q9BX66 1292 aaKnown RBP13.47□□□□□ -0.25
VPS26A-205ENST00000489656 NLNQ9BYT8 704 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 ROGDIQ9GZN7 287 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 IRF2BPLQ9H1B7 796 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 PDE7BQ9NP56 450 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 ATP6V1HQ9UI12 483 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 PLCL2Q9UPR0 1127 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 MYO15AQ9UKN7 3530 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 ARHGAP10A1A4S6 786 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 C9JVG2 144 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 RTCAO00442 366 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 GSC2O15499 205 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 MAP3K7O43318 606 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 SH3BP5O60239 455 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 CPNE6O95741 557 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 PGRP06401 933 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 ANKRD34CP0C6C1 535 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 HIST1H1TP22492 207 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 ATP5A1P25705 553 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 PPM1FP49593 454 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 HNRNPFP52597 415 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 MAPK12P53778 367 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 PLA2G16P53816 162 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 CORO7P57737 925 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 MXRA7P84157 204 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 DAB2P98082 770 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 ART3Q13508 389 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 PRTGQ2VWP7 1150 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 FAM174BQ3ZCQ3 159 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 AMZ1Q400G9 498 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 TIGD2Q4W5G0 525 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 SPANXN4Q5MJ08 99 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 MRM1Q6IN84 353 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 TMEM214Q6NUQ4 689 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 C8orf82Q6P1X6 216 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 C16orf89Q6UX73 402 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 ABHD13Q7L211 337 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 R3HCC1LQ7Z5L2 792 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 MCATQ8IVS2 390 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 PGAM4Q8N0Y7 254 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 TMEM132CQ8N3T6 1108 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 D2HGDHQ8N465 521 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 ARHGEF39Q8N4T4 335 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 CSNK1A1LQ8N752 337 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 KCT2Q8NC54 265 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 IFI44Q8TCB0 444 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 KLHL6Q8WZ60 621 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 VPS33AQ96AX1 596 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 TM4SF18Q96CE8 201 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 COQ8BQ96D53 544 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 SLC41A2Q96JW4 573 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 NPAS2Q99743 824 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 MACROD1Q9BQ69 325 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 C17orf62Q9BQA9 187 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 CADM1Q9BY67 442 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 MMADHCQ9H3L0 296 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 LRRN3Q9H3W5 708 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 ZNF768Q9H5H4 540 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 REEP4Q9H6H4 257 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 LYARQ9NX58 379 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 MAP10Q9P2G4 905 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 EXO1Q9UQ84 846 aaKnown RBP13.46□□□□□ -0.25
VPS26A-205ENST00000489656 BTBD3Q9Y2F9 522 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 SLC22A7Q9Y694 548 aa13.46□□□□□ -0.25
VPS26A-205ENST00000489656 FER1L5A0AVI2 2057 aa13.46□□□□□ -0.26
VPS26A-205ENST00000489656 A0A088AWK7 358 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 A0A1W2PQM1 296 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 CDX4O14627 284 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-205ENST00000489656 HCRTR1O43613 425 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 LRATO95237 230 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 STATHP02808 62 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 GBAP04062 536 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 GP1BAP07359 652 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 FURINP09958 794 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 ZNF888P0CJ79 500 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-205ENST00000489656 ZNF10P21506 573 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-205ENST00000489656 S100A3P33764 101 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 KIR3DL1P43629 444 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 DGKQP52824 942 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 EMP3P54852 163 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 MTTPP55157 894 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 VSX2P58304 361 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-205ENST00000489656 TAS2R50P59544 299 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 CCL7P80098 99 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 HSD11B2P80365 405 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 SLC25A3Q00325 362 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 KLC1Q07866 573 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 FOXM1Q08050 763 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 HKDC1Q2TB90 917 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 TRMT5Q32P41 509 aaKnown RBP13.45□□□□□ -0.26
VPS26A-205ENST00000489656 TCTE1Q5JU00 501 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 KIF2BQ8N4N8 673 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 ACOT4Q8N9L9 421 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 OR4D9Q8NGE8 314 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 DNAJB8Q8NHS0 232 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 SERINC2Q96SA4 455 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 PRPF18Q99633 342 aaKnown RBP13.45□□□□□ -0.26
VPS26A-205ENST00000489656 NUDT22Q9BRQ3 303 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms