RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 BTN3A2P78410 334 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 E2F2Q14209 437 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 SLMAPQ14BN4 828 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 EFTUD2Q15029 972 aaKnown RBP eCLIP11.77□□□□□ -0.53
SRRM1-216ENST00000489130 PDK4Q16654 411 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 ZNF766Q5HY98 468 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 RAPH1Q70E73 1250 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 LRRC70Q7Z2Q7 622 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 MAMDC2Q7Z304 686 aaPredicted RBP11.77□□□□□ -0.53
SRRM1-216ENST00000489130 CMC1Q7Z7K0 106 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 ISCA2Q86U28 154 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 SNX31Q8N9S9 440 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 MDS2Q8NDY4 140 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 OR2L5Q8NG80 312 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 DNAJB8Q8NHS0 232 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 STAG3L4Q8TBR4 150 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 ESAMQ96AP7 390 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 PTCD3Q96EY7 689 aaKnown RBP11.77□□□□□ -0.53
SRRM1-216ENST00000489130 SIGLEC12Q96PQ1 595 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 UTP23Q9BRU9 249 aaKnown RBP11.77□□□□□ -0.53
SRRM1-216ENST00000489130 EFCAB11Q9BUY7 163 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 NPLQ9BXD5 320 aaPredicted RBP11.77□□□□□ -0.53
SRRM1-216ENST00000489130 CD244Q9BZW8 370 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 REXO4Q9GZR2 422 aaKnown RBP11.77□□□□□ -0.53
SRRM1-216ENST00000489130 RHBGQ9H310 441 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 ZDHHC18Q9NUE0 388 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 OSGIN2Q9Y236 505 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 MMACHCQ9Y4U1 282 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 POLEQ07864 2286 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 CNTRLQ7Z7A1 2325 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 DOPEY1Q5JWR5 2465 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 A0A088AWK7 358 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ESYT3A0FGR9 886 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ANKDD1BA6NHY2 528 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 LRRTM2O43300 516 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 KERAO60938 352 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 CLDN1O95832 211 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 S100BP04271 92 aaPredicted RBP11.76□□□□□ -0.53
SRRM1-216ENST00000489130 TFEBP19484 476 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 CD22P20273 847 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ZNF10P21506 573 aaPredicted RBP11.76□□□□□ -0.53
SRRM1-216ENST00000489130 GMPRP36959 345 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 CD96P40200 585 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 KCNC1P48547 511 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 SLC7A5Q01650 507 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 DLG1Q12959 904 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 RUNX2Q13950 521 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 DOC2AQ14183 400 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 TERF2Q15554 542 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 OR1C1Q15619 314 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 TBCCQ15814 346 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 XKR6Q5GH73 641 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 HIST2H2BCQ6DN03 193 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ADNP2Q6IQ32 1131 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 C8orf74Q6P047 294 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 CCDC91Q7Z6B0 441 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 TBC1D1Q86TI0 1168 aaPredicted RBP11.76□□□□□ -0.53
SRRM1-216ENST00000489130 SCUBE1Q8IWY4 988 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ARMC10Q8N2F6 343 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 KIF2BQ8N4N8 673 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 NFAM1Q8NET5 270 aaPredicted RBP11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ADAMTS18Q8TE60 1221 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 UBTD2Q8WUN7 234 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 CCT6BQ92526 530 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 SCMH1Q96GD3 660 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 FAR2Q96K12 515 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 QRFPRQ96P65 431 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ATOH8Q96SQ7 321 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ALG9Q9H6U8 611 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 NMRAL1Q9HBL8 299 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 NECTIN3Q9NQS3 549 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 IGSF5Q9NSI5 407 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ANKRD10Q9NXR5 420 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 NUDT4Q9NZJ9 180 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ZNF490Q9ULM2 529 aaPredicted RBP11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ASB1Q9Y576 335 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 CLDN16Q9Y5I7 305 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 ICE1Q9Y2F5 2266 aa11.76□□□□□ -0.53
SRRM1-216ENST00000489130 UTP20O75691 2785 aaKnown RBP11.76□□□□□ -0.53
SRRM1-216ENST00000489130 SPTBN1Q01082 2364 aaKnown RBP11.75□□□□□ -0.53
SRRM1-216ENST00000489130 A0A0G2JN53 185 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 A0A1B0GUH1 482 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 GABRR3A8MPY1 467 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 B3GALT2O43825 422 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 CCNT2O60583 730 aaKnown RBP11.75□□□□□ -0.53
SRRM1-216ENST00000489130 NEURL1O76050 574 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 LTA4HP09960 611 aaKnown RBP11.75□□□□□ -0.53
SRRM1-216ENST00000489130 MST1P26927 711 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 CASP2P42575 452 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 PER3P56645 1201 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 HSD17B7P56937 341 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 RAB38P57729 211 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 KCNK10P57789 538 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 PMP22Q01453 160 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 PCDH1Q08174 1060 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 LAPTM5Q13571 262 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 PAGE2BQ5JRK9 111 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 SPINK14Q6IE38 97 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 TRIM40Q6P9F5 258 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms