RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 NPAP1Q9NZP6 1156 aa3.16□□□□□ -1.9
PRPF4-203ENST00000488937 ONECUT1Q9UBC0 465 aa3.16□□□□□ -1.9
PRPF4-203ENST00000488937 PEF1Q9UBV8 284 aaKnown RBP3.16□□□□□ -1.9
PRPF4-203ENST00000488937 COPS7AQ9UBW8 275 aa3.16□□□□□ -1.9
PRPF4-203ENST00000488937 PSORS1C1Q9UIG5 152 aa3.16□□□□□ -1.9
PRPF4-203ENST00000488937 WDR83OSQ9Y284 106 aa3.16□□□□□ -1.9
PRPF4-203ENST00000488937 RNF115Q9Y4L5 304 aa3.16□□□□□ -1.9
PRPF4-203ENST00000488937 RAI2Q9Y5P3 530 aa3.16□□□□□ -1.9
PRPF4-203ENST00000488937 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.16□□□□□ -1.9
PRPF4-203ENST00000488937 SLC4A4Q9Y6R1 1079 aa3.16□□□□□ -1.9
PRPF4-203ENST00000488937 RNF123Q5XPI4 1314 aa3.16□□□□□ -1.9
PRPF4-203ENST00000488937 PCDH11YQ9BZA8 1340 aa3.16□□□□□ -1.9
PRPF4-203ENST00000488937 WDR91A4D1P6 747 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 B4DGG1 531 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF879B4DU55 563 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 TCP11X1B4DZS4 312 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 PPIAL4DF5H284 164 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 POC1B-GALNT4F8VUJ3 575 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 SLC22A2O15244 555 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF208O43345 1280 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 EXTL3O43909 919 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 LDB3O75112 727 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF254O75437 659 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 GAS8O95995 478 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 NDUFB10O96000 172 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 GOT2P00505 430 aaKnown RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 IGKV2-30P06310 120 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 CA3P07451 260 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 SFTPBP07988 381 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 SMIM18P0DKX4 95 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 B4GALT1P15291 398 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 NDUFB7P17568 137 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 PPP2R1AP30153 589 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 HNRNPH1P31943 449 aaKnown RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 CCKBRP32239 447 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 TNFSF8P32971 234 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 NF2P35240 595 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 RDXP35241 583 aaKnown RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 PGGT1BP53609 377 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 SOX10P56693 466 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 CLDN20P56880 219 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 IRX3P78415 501 aaPredicted RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ZXDBP98169 803 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 FOXM1Q08050 763 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 TGM3Q08188 693 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ST3GAL1Q11201 340 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 HYAL1Q12794 435 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 DMP1Q13316 513 aaPredicted RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 DHX34Q14147 1143 aaKnown RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ELAVL3Q14576 367 aaKnown RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 KRT31Q15323 416 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 SSX2Q16385 188 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 MAPK6Q16659 721 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 CA9Q16790 459 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 TATDN3Q17R31 274 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 KLHL40Q2TBA0 621 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 PPP6R3Q5H9R7 873 aaPredicted RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 SPANXN2Q5MJ10 180 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 PIP5KL1Q5T9C9 394 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ASPHD1Q5U4P2 390 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 CARD17Q5XLA6 110 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF772Q68DY9 489 aaPredicted RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 DUS1LQ6P1R4 473 aaKnown RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM71Q6P5X7 295 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF704Q6ZNC4 412 aaPredicted RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 BZW1Q7L1Q6 419 aaKnown RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ARHGAP22Q7Z5H3 698 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 LHFPL4Q7Z7J7 247 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 CBWD2Q8IUF1 395 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 MB21D2Q8IYB1 491 aaPredicted RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF683Q8IZ20 524 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 OFCC1Q8IZS5 231 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 SLC43A2Q8N370 569 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 COMMD1Q8N668 190 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ARFGAP2Q8N6H7 521 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 HORMAD2Q8N7B1 307 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 NECAB1Q8N987 351 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 LRRC57Q8N9N7 239 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 THAP8Q8NA92 274 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ENGASEQ8NFI3 743 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 OR9K2Q8NGE7 335 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM163Q8TC26 289 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 UBTD2Q8WUN7 234 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 SLC44A1Q8WWI5 657 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 TFAP2BQ92481 460 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 GLYATL1Q969I3 302 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 PYCR2Q96C36 320 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 SENP5Q96HI0 755 aaPredicted RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 CCDC17Q96LX7 622 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 WRAP53Q9BUR4 548 aaKnown RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 NUSAP1Q9BXS6 441 aaKnown RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 LHPPQ9H008 270 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 FAM234AQ9H0X4 552 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 GLT8D2Q9H1C3 349 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 FOXP1Q9H334 677 aaPredicted RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 KLHL31Q9H511 634 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ACTL8Q9H568 366 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 LRRC4Q9HBW1 653 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 NEK6Q9HC98 313 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 MOV10Q9HCE1 1003 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms