RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MEMO1Q9Y316 297 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 OARD1Q9Y530 152 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 TEP1Q99973 2627 aaKnown RBP11.41□□□□□ -0.58
VPS16-208ENST00000487461 A0A0G2JN53 185 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 E7ESA3 106 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 TAPBPO15533 448 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 H2AFYO75367 372 aaKnown RBP11.4□□□□□ -0.58
VPS16-208ENST00000487461 PIAS1O75925 651 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 SLC6A12P48065 614 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 HNMTP50135 292 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 NAA30Q147X3 362 aaPredicted RBP11.4□□□□□ -0.58
VPS16-208ENST00000487461 NCCRP1Q6ZVX7 275 aaPredicted RBP11.4□□□□□ -0.58
VPS16-208ENST00000487461 FGD2Q7Z6J4 655 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 DOLPP1Q86YN1 238 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.4□□□□□ -0.58
VPS16-208ENST00000487461 KLHDC8AQ8IYD2 350 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 ARMC10Q8N2F6 343 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 SPATA6LQ8N4H0 392 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 FAM98AQ8NCA5 519 aaKnown RBP11.4□□□□□ -0.58
VPS16-208ENST00000487461 APCDD1LQ8NCL9 501 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 ARMC2Q8NEN0 867 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 MS4A6EQ96DS6 147 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 RUNDC3BQ96NL0 473 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 SMYD2Q9NRG4 433 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 CLDN16Q9Y5I7 305 aa11.4□□□□□ -0.58
VPS16-208ENST00000487461 APCP25054 2843 aa11.4□□□□□ -0.59
VPS16-208ENST00000487461 GTF3C1Q12789 2109 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 LRIT2A6NDA9 550 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 NCF1BA6NI72 391 aaPredicted RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 NCF1CA8MVU1 366 aaPredicted RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 TGFBR3LH3BV60 316 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 C19orf84I3L1E1 186 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 ADAM10O14672 748 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 PRAMEF4O60810 478 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 MYO1DO94832 1006 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 WDR47O94967 919 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 WISP3O95389 354 aaPredicted RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 TBX6O95947 436 aaPredicted RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 NCF1P14598 390 aaPredicted RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 GNAZP19086 355 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 AGAP20933 346 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 HNRNPH1P31943 449 aaKnown RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 RPL21P46778 160 aaKnown RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 GPR143P51810 404 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 HNRNPFP52597 415 aaKnown RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 SMSP52788 366 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 STXBP1P61764 594 aaKnown RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 CBLBQ13191 982 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 SLBPQ14493 270 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS16-208ENST00000487461 PRAMEF9Q5VWM5 478 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 TMIGD1Q6UXZ0 262 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 VN1R5Q7Z5H4 357 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 SULF2Q8IWU5 870 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 SCUBE1Q8IWY4 988 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 GHDCQ8N2G8 530 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 TMEM52Q8NDY8 209 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 GAL3ST3Q96A11 431 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 VPS39Q96JC1 886 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 PDLIM2Q96JY6 352 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 FAR2Q96K12 515 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 QRFPRQ96P65 431 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 NPLQ9BXD5 320 aaPredicted RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 RHOJQ9H4E5 214 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 NT5DC2Q9H857 520 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 GPAMQ9HCL2 828 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 PNO1Q9NRX1 252 aaKnown RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 ZNF223Q9UK11 482 aaPredicted RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 MTO1Q9Y2Z2 717 aaKnown RBP11.39□□□□□ -0.59
VPS16-208ENST00000487461 SNX24Q9Y343 169 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 MMACHCQ9Y4U1 282 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 ASB1Q9Y576 335 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 SAR1BQ9Y6B6 198 aa11.39□□□□□ -0.59
VPS16-208ENST00000487461 TRBV11-1A0A0K0K1C0 115 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 EFCAB8A8MWE9 144 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 CXorf49A8MYA2 514 aaPredicted RBP11.38□□□□□ -0.59
VPS16-208ENST00000487461 ERI3O43414 337 aaKnown RBP11.38□□□□□ -0.59
VPS16-208ENST00000487461 COX6B1P14854 86 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 ABOP16442 354 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 ZNF24P17028 368 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 ELAVL4P26378 380 aaKnown RBP11.38□□□□□ -0.59
VPS16-208ENST00000487461 PPP2R1BP30154 601 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 PTGER1P34995 402 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 PTGER4P35408 488 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 KIR3DL1P43629 444 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 MEOX1P50221 254 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 CLCN2P51788 898 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 GNG11P61952 73 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 MRPS25P82663 173 aaKnown RBP11.38□□□□□ -0.59
VPS16-208ENST00000487461 TGFBIQ15582 683 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 FBXO48Q5FWF7 155 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 C3P1Q6ZMU1 363 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 CAPN12Q6ZSI9 719 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 FRA10AC1Q70Z53 315 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 ADAMTSL2Q86TH1 951 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 ZBED8Q8IZ13 594 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 ZNF295-AS1Q8N0V1 137 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 B3GNT7Q8NFL0 401 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 TTLQ8NG68 377 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 AGAP11Q8TF27 550 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms