RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 C2orf81A6NN90 581 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 HMGB1P1B2RPK0 211 aaPredicted RBP10.8□□□□□ -0.68
TRIM56-204ENST00000487252 TXNDC9O14530 226 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 P2RX6O15547 441 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 NSA2O95478 260 aaKnown RBP10.8□□□□□ -0.68
TRIM56-204ENST00000487252 IL18BPO95998 194 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 TPH1P17752 444 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 PTPN3P26045 913 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 AVPR1BP47901 424 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 PLGLB1Q02325 96 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 RELAQ04206 551 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 FOXO1Q12778 655 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 NAA25Q14CX7 972 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 PDK2Q15119 407 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 CLEC12BQ2HXU8 276 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 C6orf52Q5T4I8 152 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 AGBL2Q5U5Z8 902 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 CCDC137Q6PK04 289 aaKnown RBP10.8□□□□□ -0.68
TRIM56-204ENST00000487252 ABHD13Q7L211 337 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 SERPINA9Q86WD7 417 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 SLC22A15Q8IZD6 547 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 NFAM1Q8NET5 270 aaPredicted RBP10.8□□□□□ -0.68
TRIM56-204ENST00000487252 OR13C4Q8NGS5 318 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 ZBED6CLQ96FA7 236 aaPredicted RBP10.8□□□□□ -0.68
TRIM56-204ENST00000487252 ATP6V1G3Q96LB4 118 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 WDR83Q9BRX9 315 aaKnown RBP10.8□□□□□ -0.68
TRIM56-204ENST00000487252 DPH7Q9BTV6 452 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 DPH5Q9H2P9 285 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 LANCL2Q9NS86 450 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 C6orf203Q9P0P8 240 aaPredicted RBP10.8□□□□□ -0.68
TRIM56-204ENST00000487252 IP6K2Q9UHH9 426 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRIM56-204ENST00000487252 PRSS21Q9Y6M0 314 aa10.8□□□□□ -0.68
TRIM56-204ENST00000487252 PRKDCP78527 4128 aaKnown RBP10.8□□□□□ -0.68
TRIM56-204ENST00000487252 DOCK7Q96N67 2140 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 IGKV1-8A0A0C4DH67 115 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 CASKO14936 926 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 VPS26AO75436 327 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 FTH1P02794 183 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 PGRP06401 933 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 NUDT17P0C025 328 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 PTPN7P35236 360 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 RPL21P46778 160 aaKnown RBP10.79□□□□□ -0.68
TRIM56-204ENST00000487252 ZNF140P52738 457 aaPredicted RBP10.79□□□□□ -0.68
TRIM56-204ENST00000487252 WNT3P56703 355 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 OR4D2P58180 307 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 TAS2R40P59535 323 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 DHX9Q08211 1270 aaKnown RBP10.79□□□□□ -0.68
TRIM56-204ENST00000487252 ZNF844Q08AG5 666 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 KLF1Q13351 362 aaPredicted RBP10.79□□□□□ -0.68
TRIM56-204ENST00000487252 ACSF3Q4G176 576 aaPredicted RBP10.79□□□□□ -0.68
TRIM56-204ENST00000487252 CCDC38Q502W7 563 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 SUSD1Q6UWL2 747 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 DNM1P46Q6ZS02 220 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 PRSS41Q7RTY9 318 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 LACC1Q8IV20 430 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 VRK3Q8IV63 474 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 TMEM156Q8N614 296 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 SGMS2Q8NHU3 365 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 TSLPQ969D9 159 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 ZBTB9Q96C00 473 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 MARK4Q96L34 752 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 FMO2Q99518 471 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 BEX2Q9BXY8 128 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 EPB41L4BQ9H329 900 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 IL1RL2Q9HB29 575 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 HOMER3Q9NSC5 361 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 KCMF1Q9P0J7 381 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 WHRNQ9P202 907 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 DRG1Q9Y295 367 aaKnown RBP10.79□□□□□ -0.68
TRIM56-204ENST00000487252 SNX24Q9Y343 169 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 TRRAPQ9Y4A5 3859 aa10.79□□□□□ -0.68
TRIM56-204ENST00000487252 YLPM1P49750 1951 aaKnown RBP10.78□□□□□ -0.68
TRIM56-204ENST00000487252 AHRRA9YTQ3 701 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 ITGA10O75578 1167 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 IL2RAP01589 272 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 KRT14P02533 472 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 RPN2P04844 631 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 NFKB1P19838 968 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 LOXP28300 417 aaPredicted RBP10.78□□□□□ -0.68
TRIM56-204ENST00000487252 OPRM1P35372 400 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 BCL6P41182 706 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 EIF3BP55884 814 aaKnown RBP10.78□□□□□ -0.68
TRIM56-204ENST00000487252 ATP5J2P56134 94 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 VEZF1Q14119 521 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 SLC10A1Q14973 349 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 PDK1Q15118 436 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 ETFDHQ16134 617 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 CCNG2Q16589 344 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 TYSND1Q2T9J0 566 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 KCTD11Q693B1 232 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 ZNF425Q6IV72 752 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 GK5Q6ZS86 529 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 MICALCLQ6ZW33 695 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 PLEKHM3Q6ZWE6 761 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 PIANPQ8IYJ0 282 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 RCOR2Q8IZ40 523 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 KCTD6Q8NC69 237 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 APCDD1LQ8NCL9 501 aa10.78□□□□□ -0.68
TRIM56-204ENST00000487252 RNF157Q96PX1 679 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms