RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TMEM178AQ8NBL3 297 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 MARVELD3Q96A59 401 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 MS4A6EQ96DS6 147 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 TMEM79Q9BSE2 394 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 NPIPA1Q9UND3 350 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 ENTPD4Q9Y227 616 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 ASPDHA6ND91 283 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 LRIT2A6NDA9 550 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 ERI3O43414 337 aaKnown RBP22.96■■□□□ 1.27
LIME1-206ENST00000487026 RAD51CO43502 376 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 PRAMEF4O60810 478 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 GRNP28799 593 aaKnown RBP22.96■■□□□ 1.27
LIME1-206ENST00000487026 GMPRP36959 345 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 HSPA7P48741 367 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 CALCOCO2Q13137 446 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 OR4D1Q15615 310 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 C3AR1Q16581 482 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 PRAMEF9Q5VWM5 478 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 ADNP2Q6IQ32 1131 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 MRGPRGQ86SM5 289 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 ZNF227Q86WZ6 799 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 GPSM1Q86YR5 675 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 TMEM52Q8NDY8 209 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 ARMC2Q8NEN0 867 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 THAP3Q8WTV1 239 aaPredicted RBP22.96■■□□□ 1.27
LIME1-206ENST00000487026 GAL3ST3Q96A11 431 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 GPR137Q96N19 417 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 FRMD6Q96NE9 622 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 DEFB126Q9BYW3 111 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 PNO1Q9NRX1 252 aaKnown RBP22.96■■□□□ 1.27
LIME1-206ENST00000487026 DNAJC11Q9NVH1 559 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 WWOXQ9NZC7 414 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 WHRNQ9P202 907 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 TXNDC16Q9P2K2 825 aa22.96■■□□□ 1.27
LIME1-206ENST00000487026 FAM187AA6NFU0 413 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 SLC25A12O75746 678 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 TBX6O95947 436 aaPredicted RBP22.95■■□□□ 1.26
LIME1-206ENST00000487026 PRF1P14222 555 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 CD1DP15813 335 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 HNRNPFP52597 415 aaKnown RBP22.95■■□□□ 1.26
LIME1-206ENST00000487026 PLA2G16P53816 162 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.95■■□□□ 1.26
LIME1-206ENST00000487026 C3orf62Q6ZUJ4 267 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 VN1R5Q7Z5H4 357 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 KRT78Q8N1N4 520 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 SNX31Q8N9S9 440 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 SPATA4Q8NEY3 305 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 CDKL2Q92772 493 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 TSPAN17Q96FV3 270 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 PDLIM2Q96JY6 352 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 RBBP8Q99708 897 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 GRHL1Q9NZI5 618 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 TINAGQ9UJW2 476 aa22.95■■□□□ 1.26
LIME1-206ENST00000487026 ZNF490Q9ULM2 529 aaPredicted RBP22.95■■□□□ 1.26
LIME1-206ENST00000487026 TCRBV9S1A1TA0A576 114 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 TGFBR3LH3BV60 316 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 HNRNPRO43390 633 aaKnown RBP22.94■■□□□ 1.26
LIME1-206ENST00000487026 MYO1DO94832 1006 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 STMN1P16949 149 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 PPP2R1BP30154 601 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 GGT5P36269 586 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 CYB561P49447 251 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 C2orf54Q08AI8 447 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 KRTCAP3Q53RY4 240 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 SRRM1Q8IYB3 904 aaKnown RBP22.94■■□□□ 1.26
LIME1-206ENST00000487026 CPSF7Q8N684 471 aaKnown RBP22.94■■□□□ 1.26
LIME1-206ENST00000487026 TTLQ8NG68 377 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 QRFPRQ96P65 431 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 GPR22Q99680 433 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 CPNE1Q99829 537 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 CAPS2Q9BXY5 557 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 NT5DC2Q9H857 520 aa22.94■■□□□ 1.26
LIME1-206ENST00000487026 TRBV11-1A0A0K0K1C0 115 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 ANKDD1BA6NHY2 528 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 FAM159BA6NKW6 160 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 CLGNO14967 610 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 EIF3HO15372 352 aaKnown RBP eCLIP22.93■■□□□ 1.26
LIME1-206ENST00000487026 NME2P1O60361 137 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 STK16O75716 305 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 FAM155BO75949 473 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 NME2P22392 152 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 CASP6P55212 293 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 GPX6P59796 221 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 ART3Q13508 389 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 DOC2AQ14183 400 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 XKR6Q5GH73 641 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 RNFT1Q5M7Z0 435 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 TICAM1Q8IUC6 712 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 SPPL2CQ8IUH8 684 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 SIAH3Q8IW03 269 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 CTAGE3PQ8IX95 158 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 TCAIMQ8N3R3 496 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 FAM47BQ8NA70 645 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 FAM98AQ8NCA5 519 aaKnown RBP22.93■■□□□ 1.26
LIME1-206ENST00000487026 APCDD1LQ8NCL9 501 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 B3GNT7Q8NFL0 401 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 ANP32BQ92688 251 aaKnown RBP22.93■■□□□ 1.26
LIME1-206ENST00000487026 EXT2Q93063 718 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 MAGED4Q96JG8 741 aa22.93■■□□□ 1.26
LIME1-206ENST00000487026 NPLQ9BXD5 320 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms