RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	DEPDC1	Q5TB30	811 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	ZCCHC23	Q6ZST2	131 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	PRSS41	Q7RTY9	318 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	RNF175	Q8N4F7	328 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	OR2L5	Q8NG80	312 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	WDR20	Q8TBZ3	569 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	AGAP11	Q8TF27	550 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	FKBP10	Q96AY3	582 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	RGMA	Q96B86	450 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	SERPINI1	Q99574	410 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	MS4A8	Q9BY19	250 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	FAM117A	Q9C073	453 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	ROGDI	Q9GZN7	287 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	DMRT3	Q9NQL9	472 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	SLC22A11	Q9NSA0	550 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF446	Q9NWS9	450 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	NMRK1	Q9NWW6	199 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	HCN3	Q9P1Z3	774 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	IL17B	Q9UHF5	180 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF225	Q9UK10	706 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	NAV2	Q8IVL1	2488 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967		A0A0G2JN53	185 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF860	A6NHJ4	632 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	SAP18	O00422	153 aa	Known RBP	13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	MANBA	O00462	879 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	UBFD1	O14562	309 aa	Known RBP	13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	RDH16	O75452	317 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	B3GALT4	O96024	378 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	PDYN	P01213	254 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	SMIM10L1	P0DMW3	83 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	ITGAX	P20702	1163 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	F8A1	P23610	371 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	SERPINB5	P36952	375 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	FOLR3	P41439	243 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	MAT1A	Q00266	395 aa	Known RBP	13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	MC1R	Q01726	317 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	SRSF6	Q13247	344 aa	Known RBP	13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	RCN2	Q14257	317 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	ADPRM	Q3LIE5	342 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	FAM198B	Q6UWH4	519 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	CUZD1	Q86UP6	607 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	HOMEZ	Q8IX15	550 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	AFAP1L2	Q8N4X5	818 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	OR51Q1	Q8NH59	317 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	MIEF2	Q96C03	454 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	SMIM10	Q96HG1	83 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	SLC45A3	Q96JT2	553 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	KCNC2	Q96PR1	638 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	TBCD	Q9BTW9	1192 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	ACTL8	Q9H568	366 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	CLK4	Q9HAZ1	481 aa	Known RBP	13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	CPNE5	Q9HCH3	593 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	PSD3	Q9NYI0	1048 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	AHSP	Q9NZD4	102 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	TCFL5	Q9UL49	500 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	SSUH2	Q9Y2M2	353 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	PTRH2	Q9Y3E5	179 aa	Known RBP	13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	MAP4K5	Q9Y4K4	846 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	TIMM22	Q9Y584	194 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	PCDHGA6	Q9Y5G7	932 aa		13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	MRPS18B	Q9Y676	258 aa	Known RBP	13.1	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF891	A8MT65	544 aa	Predicted RBP	13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	EFS	O43281	561 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	CHST10	O43529	356 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	B3GALT2	O43825	422 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	CREG1	O75629	220 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	HSPA4L	O95757	839 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	CHEK2	O96017	543 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	SERPINE1	P05121	402 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	DHRS4L1	P0CG22	281 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	UROS	P10746	265 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	GRK2	P25098	689 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	SSR2	P43308	183 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	MTTP	P55157	894 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	RPS18	P62269	152 aa	Known RBP	13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	SNRPN	P63162	240 aa	Known RBP	13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	RHD	Q02161	417 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	PTPN13	Q12923	2485 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	STX3	Q13277	289 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	CUL3	Q13618	768 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	NKG7	Q16617	165 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	SYT16	Q17RD7	645 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	HSP90B2P	Q58FF3	399 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	VWA2	Q5GFL6	755 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	ARL13A	Q5H913	290 aa	Predicted RBP	13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	MFSD4B	Q5TF39	518 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	MRPL14	Q6P1L8	145 aa	Known RBP	13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	ABHD17C	Q6PCB6	329 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	SHISA6	Q6ZSJ9	500 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	COX15	Q7KZN9	410 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	PDSS2	Q86YH6	399 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	TRIM42	Q8IWZ5	723 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	PRSS58	Q8IYP2	241 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	AMER3	Q8N944	861 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	STT3B	Q8TCJ2	826 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	SNRNP27	Q8WVK2	155 aa	Known RBP	13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	STARD8	Q92502	1023 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	KCNA7	Q96RP8	456 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms